Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01138 ATGGCTTCGACGGTAGCTTCAGGTTTAACCGCGGAAGCTCCTGAGTTTCACCCCACCAACCATGTTCAAAAACTTCACCCTCCATACCTCACTTTCACTCCCCTCAGGCATCAACCTTCTTACCCTTTTTTCTATTACTACTATCCCACTGCCACAAAACATCATTTTCACTCCTTTCGCTTTCATGCTAACCACCCTCTCACCACCGCAACTCCCGCTTTTCCACCATCCAGCGGTATGAAAAATGAAATAGCGGTGGAGGCGCAATCTTCGGAGGGTAATGATGGAGAAATAGAAGACCGTCGTTCTCACAGGTTGAGAATCCCACGGCTTGAGTGGAGGAAGAAAGGAGGAGATGATGCTGAAAAATACCCTAAACTTAAGAATGAGAGTTTCAGAAGGAATCATCACAAAGAATATGTTAATATCCAACAACAACACTCTAGGGCTTCCACCTACGGGAAGAATAAAGCAAGTATTTTTCCTGTGGTTCCGGTTCGTCCCGATGGAGATGAAACAACTGTTATGATCAAAAACGTTCCTAGCAAATATACTCGAGACATGATAGTCAAGTTCTTGGAGAACCATTGCATGGTTGAAAATGCTAAAGATCAAGAAAATGGACAAGAAAACACTTTCGCCATTGACTTTGTTTACTTGCCAATAGATTTCAGAACTGGTTTAAACAAAGGATATGCTTTTGTAAATTTCACAAAGCCTAGTGCAGCTTGGAGATTTCTTGTGACAGCATCGAATCAGAAATGGGAATTGTTCCTTTCCCACAAGATACGTGATGTCGTTGCCGCACGCCTCCAGGGAAAGGAGAAGCTGGAGAAGCATTTCGTTAGTGTAAATTTTCCCTGTGAGTCCGAGGAAGTTCTCCCTCTGTGCTTTAGTCCACCTCGGGATGGTGTGATAAAAGGAAACCAGAGGACATTGGGGAGGCTTCTCTATAAGTCTCGGTAG 966 0.44 MASTVASGLTAEAPEFHPTNHVQKLHPPYLTFTPLRHQPSYPFFYYYYPTATKHHFHSFRFHANHPLTTATPAFPPSSGMKNEIAVEAQSSEGNDGEIEDRRSHRLRIPRLEWRKKGGDDAEKYPKLKNESFRRNHHKEYVNIQQQHSRASTYGKNKASIFPVVPVRPDGDETTVMIKNVPSKYTRDMIVKFLENHCMVENAKDQENGQENTFAIDFVYLPIDFRTGLNKGYAFVNFTKPSAAWRFLVTASNQKWELFLSHKIRDVVAARLQGKEKLEKHFVSVNFPCESEEVLPLCFSPPRDGVIKGNQRTLGRLLYKSR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01138 321 Pfam RNA recognition motif 2 173 281 IPR007201 -
Vifa6g01138 321 SUPERFAMILY RNA-binding domain, RBD 142 254 IPR035979 GO:0003676
Vifa6g01138 321 Gene3D - 82 279 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01138 Vifa-Chr6 368938309 368939576 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01138 - - mtr:120580283 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01138 6 368938309 368939576 Vifa6g01138 6 368938309 368939576 ECH