Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01136 ATGACGGCAGCAGCAACCGCATCCTCTCACCTCCTCCCCGTTCTTCGTTCACAGCCGCCGTCACCGTCGTCTTCTTCCTCTTTCATTTCATTTCTCAAACCTTTCTTTCTTCCTTCTTCCAATATTACCCTTCGACGACTTCAATGTCATCATGCACCTCTTCTCAAAACCCTTCCACACTCTTTCTTATCCACACCCTCTTTTTCTTCCCGCGCTTTTTCCTACACCCCTCCCCTCTCCGCTGTAGTTGGAGCTTCATCTCCAAATTCCACAGAAGATGCATCGGAAGAAGAAGAAGAATATGATGAAGAATCTAGTTTCACTGAAAGTGACAATGTTGAAGATACGCAAGTGGTGGATTCGACTTCGTTGCCGTTGGTGGGAAAGAGGGAAGAGAGATTGAATTTGGAGGTGCCGAGTTTGAGTGTGAAAGAAAGGAAAGAACTTGCGTCTTATGCACATGGTTTGGGGAAAAAGCTTAATACACAGTTGGTGGGTAAATCTGGTGTTACGCCCAATCTTGTTACGGCTTTCACTGATAACCTTGAAGCTAACGAACTTCTCAAGATTAAAATACATGGGAGTTGTCCAGGTGAGTTAGATGATGTTATGAAGCAGTTGGAAGAAGCAACTGGCTCAGTGATCGTTGATCAGATTGGTCGAACCCTTATTTTATACAGGCCTAGTCTCTCCAAATTGAAGGTAGAAGAAAAGAGGAAACAAGTTCGGAAACTTTTTCTGGAAAAACAACATAAACGAAGACTACTAATTAATGGGGATAATAAACAAGCACCCAAATCATCAAAGCGAGGTTCACCATGGAAAGCGAGAAGCAGTAGCTCATAA 846 0.435 MTAAATASSHLLPVLRSQPPSPSSSSSFISFLKPFFLPSSNITLRRLQCHHAPLLKTLPHSFLSTPSFSSRAFSYTPPLSAVVGASSPNSTEDASEEEEEYDEESSFTESDNVEDTQVVDSTSLPLVGKREERLNLEVPSLSVKERKELASYAHGLGKKLNTQLVGKSGVTPNLVTAFTDNLEANELLKIKIHGSCPGELDDVMKQLEEATGSVIVDQIGRTLILYRPSLSKLKVEEKRKQVRKLFLEKQHKRRLLINGDNKQAPKSSKRGSPWKARSSSS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01136 281 Pfam CRS1 / YhbY (CRM) domain 142 227 IPR001890 GO:0003723
Vifa6g01136 281 MobiDBLite consensus disorder prediction 92 110 - -
Vifa6g01136 281 Gene3D - 140 241 IPR035920 -
Vifa6g01136 281 PANTHER CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED 1 277 - -
Vifa6g01136 281 MobiDBLite consensus disorder prediction 256 281 - -
Vifa6g01136 281 MobiDBLite consensus disorder prediction 82 115 - -
Vifa6g01136 281 SUPERFAMILY YhbY-like 141 229 IPR035920 -
Vifa6g01136 281 ProSiteProfiles CRM domain profile. 139 238 IPR001890 GO:0003723
Vifa6g01136 281 FunFam RNA-binding CRS1 / YhbY (CRM) domain protein 140 239 - -
Vifa6g01136 281 SMART CRS1_YhbY_2 141 227 IPR001890 GO:0003723
Vifa6g01136 281 MobiDBLite consensus disorder prediction 261 281 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01136 K07574 - gmx:100779359 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01136 6 368102674 368104010 Vifa6g01136 6 368102674 368104010 ECH