Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01119 ATGGATGGTTTCCGTGTAGTGACTTGTCAATCCTGCAACTTTGTTGGAGAACCTTTCGAATCGGATGGCTTCTTCTTCTGCAGTAGCTGCGGAGAGAAAAATCAGGATGCTTTTGATAATGGTGCCGAAGAGGAAGAAGCCTTCGGTACCGCCGGTGGTATCTACCTGCCCAGTCACCAACGCCGGGCATCTGCTCATTCCGAAGCAATTGATGTTCCCCCCATCTCACAATATGATCCATTATCCCAATCCAATTTACTTTCCAGCCTTGGGTTAATTGAAGTCAAACAAGAGAATGTTGACCTATCTCACTCCCATTTTAGTCCCTCAACTCCTGCTGATTTTGGAGGCTCCAATGTTCCTAGCTCTGAGGATTACCACAATGAGATAAGGCTGCGTTATGTGTTTGGGTTGCAAATTATGATTGAGCTTCAATGTGAAGCTCTGGTGAAAGAGTTTAAGGTTACCCCTTTGATATGTGGCTTGGTTGGACCAATTTGGTTGAGATTTGTCGCCAAGACTGGTGTTTTCGACGAAGACTGGGCTAATAAAGTACTTCATGACTCTGAGATGCAGAAAGAAGGAGATCCAGAAGATTATAATTCACGCGGTAAATACAGATCAGAACCTCACAATATGGAAGCCATCATGCCTTCAGACATAATTAAGTGGGCACGTGAAGGGAAGCTTCCGTATTTATCTGCTTTTGTTAAAATTGAAGAGCGTTTTAAAAGTCCATCAATTGCATGTCCTATCAGTTCAAGTTATATGTTCAGGCCTAAACGAGCTCTTTCGGTACATAAACTCGAGTCATATGCCTCATCAATTGCTCAGTTTATAGGCTTGGAGTTACCTCCTGTTAACTTTTATGCATTAGCTTATCGTTATCTTGAAAAGTTATCTCTTCCTGTTGAAAAGATTCTTCCGTATGCATGTCGCATTTATGAATGGTCGATGCCTCCAGATTTGTGGTTATCGTTATCCAAGGATTATTTTAGACTACCTACTCATGTTTGTGTTGTCTCGGTTCTGGTAGTAGCAATAAGGATTTTGTATAACATTAATGGTTATGGAGAATGGGAGAAAAGTTTATCTCATAATGGTAGTGCCAAATATTCAGCTAAAAATCCAGCAAAACATCGAAAACACGATTTGGATTGTGCTGAGCTTCTCCAACACCTTCACGCAATATATAATGAGATTGCAGACACCAGTGATTATTCTAAGGACTTACCTGCATATCTCAAATACTGTAAGGATGTTGTGTTTGCTGGAGTAGAGCCATCCTATGAAGAAAAAAATGTGATTGAAAACCTATGGGAACACTATCAGAATGAAGAGATATTTTTCTTTCAGAATACTAAATCATCACAACCTGGAGAGCAAGACAATTCTTTTAATAGCACGGGGTCGAGAAATGAAGGATGTGTCAAAGAGACATCTAAAAATGAAAAGGATAGAGAATGTTTCAACGAACCCTCTCATGACAATGGCGGCTGCGTTGCAGATGACTTGCCTGGAAGTTTAAGTTATGATAATTCCTCCAAGAGTTTGCCAGACAGAGAAGCCATTATTAGACAGTTGAAATTAGACATGGAGGAAAACCGATTTTGTTACGTAACACCCAATGTCAAGCCGACAAAACTTGATTATGTTCACTATGTTCGAAAGAAGGATAAAGGTGCCCTGTCTTATGTTGCTCATGCTGATTATTACATTTTGCTTAGGGCTTTTGCTAGAGTTGCATATGATAATGACATTCGGATTTTGCATATTGGTGTTTTGAGCCTTGAGAGAAGACTTGTTTGGCTAGAGAAAAAGATTGGTCAATGCTTGCATTTGAAACCTCCTAATAGTTCTTGTCAATATTGTACTCTTAGGCCAACTGAAAATGGATCAGATGATGGGTCTGAACACAAAACTTGA 1926 0.4003 MDGFRVVTCQSCNFVGEPFESDGFFFCSSCGEKNQDAFDNGAEEEEAFGTAGGIYLPSHQRRASAHSEAIDVPPISQYDPLSQSNLLSSLGLIEVKQENVDLSHSHFSPSTPADFGGSNVPSSEDYHNEIRLRYVFGLQIMIELQCEALVKEFKVTPLICGLVGPIWLRFVAKTGVFDEDWANKVLHDSEMQKEGDPEDYNSRGKYRSEPHNMEAIMPSDIIKWAREGKLPYLSAFVKIEERFKSPSIACPISSSYMFRPKRALSVHKLESYASSIAQFIGLELPPVNFYALAYRYLEKLSLPVEKILPYACRIYEWSMPPDLWLSLSKDYFRLPTHVCVVSVLVVAIRILYNINGYGEWEKSLSHNGSAKYSAKNPAKHRKHDLDCAELLQHLHAIYNEIADTSDYSKDLPAYLKYCKDVVFAGVEPSYEEKNVIENLWEHYQNEEIFFFQNTKSSQPGEQDNSFNSTGSRNEGCVKETSKNEKDRECFNEPSHDNGGCVADDLPGSLSYDNSSKSLPDREAIIRQLKLDMEENRFCYVTPNVKPTKLDYVHYVRKKDKGALSYVAHADYYILLRAFARVAYDNDIRILHIGVLSLERRLVWLEKKIGQCLHLKPPNSSCQYCTLRPTENGSDDGSEHKT 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01119 641 MobiDBLite consensus disorder prediction 477 493 - -
Vifa6g01119 641 MobiDBLite consensus disorder prediction 456 493 - -
Vifa6g01119 641 PANTHER TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B 214 624 IPR033599 GO:0001164|GO:0001188|GO:0006360|GO:0070860
Vifa6g01119 641 MobiDBLite consensus disorder prediction 456 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01119 Vifa-Chr6 364288343 364291925 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01119 - - psat:127105265 1084.32