Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01115 ATGGCTTCTGCAGCATCAGCATCTCTTTTCAAGTCATCACTTGTTCTTGACAAGTCTGAATGGGTGAAGGGACAAACCCTCTTCCGTCAGCCTTCTTCTGTGTCAGTCGTGAGATGCAGCCCCACCGCTCCATCAAGTCTCACTGTCAGAGCAGGTTCATACACTGACGAGCTCGTCAAGACCGCGAAAACAATTGCTTCACCAGGGCGTGGTATTTTGGCGATGGATGAGTCTAATGCTACATGCGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAACACCGAAGTTAACCGTCAAGCATGGCGTACACTTCTGGTAACAGTTCCAACACTTGGAGAGTACGTCTCTGGCGCCATTCTCTTCGAGGAGACTCTTTATCAATCCACAACAGATGGAAGGAAGATTGTCGATGTGCTTATAGAGCAAAACATTGTTCCCGGTATTAAAGTTGACAAGGGTCTGGTGCCCCTTGCTGGTTCCAATGACGAGTCATGGTGCCAAGGTCTAGACGGTCTTGCCTCCCGGTCAGCTGCATACTACCAACAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTGGCAGTCAAGGAAGCAGCCTGGGGTCTTGCTCGCTATGCTGCAATTAGTCAGGACAATGGGTTGGTCCCAATTGTCGAACCAGAGATCTTGCTTGATGGAGAACACGGTATCGACAGAACTTTTGAAGTAGCCCAAAAGGTTTGGGCAGAAGTTTTCTACTACCTTGCTGAGAACAATGTCCAATTTGAGGGTATTCTCCTCAAGCCTAGCATGGTTACTCCAGGAGCTGAGTCTAAGGACAAAGCCTCTCCTACAAAAGTTGCCGAGTACACCCTCAATCTCCTTCACAGGAGAATTCCTCCTGCTGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACCTGAATGCCATGAACCAATCTCCAAACCCATGGCACGTGTCGTTCTCATACGCAAGAGCTCTCCAAAATACCGCATTGAAAACATGGGGAGGCCGCCCAGAGAACGTGAAGGCGGCACAAGAGGCGCTCCTTTTCCGCGCCAAGTCCAACTCACTTGCTCAACTTGGAAAGTACATTGGTGATGGTGAATCTGAGGAAGCCAAAAAGGAATTGTTTGTCAAAGGCTACTCTTACTAA 1206 0.4934 MASAASASLFKSSLVLDKSEWVKGQTLFRQPSSVSVVRCSPTAPSSLTVRAGSYTDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYVSGAILFEETLYQSTTDGRKIVDVLIEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRPENVKAAQEALLFRAKSNSLAQLGKYIGDGESEEAKKELFVKGYSY 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01115 401 NCBIfam fructose-bisphosphate aldolase class I 57 377 - -
Vifa6g01115 401 Gene3D Aldolase class I 37 400 IPR013785 -
Vifa6g01115 401 FunFam Fructose-bisphosphate aldolase 39 400 - -
Vifa6g01115 401 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 262 272 IPR029768 -
Vifa6g01115 401 Pfam Fructose-bisphosphate aldolase class-I 57 401 IPR000741 GO:0004332|GO:0006096
Vifa6g01115 401 SUPERFAMILY Aldolase 47 401 - -
Vifa6g01115 401 CDD FBP_aldolase_I_a 56 381 - -
Vifa6g01115 401 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 52 401 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01115 Vifa-Chr6 363542693 363545241 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01115 54 401 Miscellaneous Gene Families AT3G52930 56.250 8.23e-134 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01115 K01623 - gmx:100818383 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01115 6 363542693 363545241 Vifa6g01115 6 363542693 363545241 ECH