Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01103 ATGGAAATCAGTAGATTCACAGCTCTCACTTGGTCTCATACCGTTTCTCCTTCTCTTCACCTTCCTCAACCCCTCTTTGCCAGGGAGGCTAGGAGGCTTAGGGTTTGGTGTGTCACTGATCAAAGCTCCAAGGGAAATCAAATGATCATATCTGTAACTGGAGCTACAGGTTTTATAGGTAGAAGGTTGGTGCAAAAGCTGCAAGCAGAAAATCACAGCGTTCATGTCCTGACTCGCTCTAAATCTAAAGCAGAACTAATTTTTCCGGTGAAAGACTTTCCAGGAGTCAAGATTGCCGAGGAGCCAGAATGGAAAGATTGCATTCAGGGTTCAACAGGTGTTGTGAATTTGGCAGGATTGCCGATAAGTACCAGATGGTCTTCTGAGATTAAAAAAGAAATCAAGCAGAGCAGGATAAGAGTGACTTCAAAAGTTGTAGAATTAATAAAAAGTGCACCTGTTGATATTCGGCCCAAAGTTTTGGTTAGTGCAACAGCCGTTGGTTATTATGGCACCAGTGAGACGCAAGTCTTTGATGAACAAAGTCCATCAGGAAAGGATTACCTGGCTGAGGTTTGCAGAGAATGGGAATCAACGGCTCTAAAGGTTAATGGAGATGTTAGAGTGGCTCTAATTCGCATCGGTGTTGTTCTTGGTAAAGATGGTGGAGCACTAGCTAAAATGATACCTCTCTTCATGATGTTTGCTGGTGGACCTATAGGTTCTGGAAACCAGTGGTTCTCCTGGATTCATCTGGATGACATTGTCAATTTAATATACGAAGCACTATCAAATCCATCCTACAAAGGAGTTATCAATGGAACTGCACCAAATCCTGTGAGATTCTCAGAGTTGTGTGAACAGTTGGGACATGTCTTGGGTCGTCCCTCGTGGCTTCCGGTGCCTGGCTTTGCCCTCAAGGCTGTTCTTGGAGAAGGTGCTTCTGTGGTTTTAGAAGGGCAAAGAGTGGTTCCTACTCAAGCGAAGAAGTTGGGTTTCTCATTCAAATATTCATACGTGAAGGATGCACTTAAAGAAATTATTTCTTGA 1050 0.4352 MEISRFTALTWSHTVSPSLHLPQPLFAREARRLRVWCVTDQSSKGNQMIISVTGATGFIGRRLVQKLQAENHSVHVLTRSKSKAELIFPVKDFPGVKIAEEPEWKDCIQGSTGVVNLAGLPISTRWSSEIKKEIKQSRIRVTSKVVELIKSAPVDIRPKVLVSATAVGYYGTSETQVFDEQSPSGKDYLAEVCREWESTALKVNGDVRVALIRIGVVLGKDGGALAKMIPLFMMFAGGPIGSGNQWFSWIHLDDIVNLIYEALSNPSYKGVINGTAPNPVRFSELCEQLGHVLGRPSWLPVPGFALKAVLGEGASVVLEGQRVVPTQAKKLGFSFKYSYVKDALKEIIS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01103 349 Pfam Domain of unknown function (DUF1731) 301 347 IPR013549 -
Vifa6g01103 349 NCBIfam TIGR01777 family oxidoreductase 50 344 IPR010099 -
Vifa6g01103 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 44 348 IPR036291 -
Vifa6g01103 349 Pfam NAD dependent epimerase/dehydratase family 50 267 IPR001509 -
Vifa6g01103 349 CDD SDR_a8 50 348 - -
Vifa6g01103 349 Gene3D - 43 338 - -
Vifa6g01103 349 PANTHER SUGAR NUCLEOTIDE EPIMERASE RELATED 35 348 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01103 K07071 - gmx:100814881 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01103 6 361043808 361048241 Vifa6g01103 6 361043808 361048241 ECH