Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01046 ATGTATCCATCAATTACCACCGATAATCTCTCACCTTCAGAACATGTTATGGTCACTGTCCCCGACGTGATTCTCCATCTCATAGAAAAAGATTCAAGCGTCCACTTAGCTTCCGGCGACTTAACCATAGTAAGCCTCAAAGAAGGAAACAACGTAGCAGCAGTTATCGCTCGCATCGGTGATCAAATCCAATGGCCATTAGCCAAAGACGTTTCGACTGTGAAACTAGACGAGTCCCATTACTTTTTCACACTTAAGGTTCCACAGAGTAATAATACAGAAGAGAATATTGAGTCTCAAGTTTTGAACTATGGGTTGACGGTTGTAACAAAAGGGCGAGAGAAAGTTTTGGTTTTGAAGGAACTTGATAAGGTTCTTGAAAAATATAGTTTTCTTTCTGTGGAGAAGGTGAAGGGTGTGGAAGGGTGGGAGGTTTTGGAGAAAAAGGAGGTTTTGGAGGAAAGTTCTGCGGCTGCTTATTGGACAACCTTGGCTCCAAACGTGGAGGATTACAATGGAAGATTTGCAAGATGGATTGCGGCAGGGTCAGGACAAATGATCAGGGGGATTCTGTTTTGTGGTGATGTTACTGTGGAGAGATTGAAATGGGGGAATGATTTCATGAAGAAGAGGTTGCAACCTGGTTCTTCTCAATCACAGATTAGTCCACATGCCATGGCGAGCATGAAAAGGGTTAGGAAGTTGACAAAGATGTCAGAGAATGTGGCTCTTGGTGTTCTCTCTGGGGTTGTTAAAGTGTCTGGATTCTTTACTAGTTCGGTGGTGAACTCTAAGCCAGGGAAGAAGTTGTTTAGTCTTCTTCCTGGAGAAATAGTGCTTGCTACACTTGATGGATTCAATAAGGTGTGTGATGCTGCAGAAGTAGCTGGAAGGAATGTTATGTCCACTTCCTCAGTTGTGACCACTGGACTAGTTACACATAAATACGGAGAACAAGCAGGTGAGGTTACAAATGAAGGGCTTAGCGCTGCAGGGCATGCATTTGGTACCGCTTGGGCTGTGTTCAAACTAAGGAAGGCACTCAACCCCAAGAGTGTGATCAAACCAACAACAATGGCTAAAGCTGCTGCTCAAGCAAGTTCTACTCAACTCAAGGCTAAAAAATAA 1128 0.4371 MYPSITTDNLSPSEHVMVTVPDVILHLIEKDSSVHLASGDLTIVSLKEGNNVAAVIARIGDQIQWPLAKDVSTVKLDESHYFFTLKVPQSNNTEENIESQVLNYGLTVVTKGREKVLVLKELDKVLEKYSFLSVEKVKGVEGWEVLEKKEVLEESSAAAYWTTLAPNVEDYNGRFARWIAAGSGQMIRGILFCGDVTVERLKWGNDFMKKRLQPGSSQSQISPHAMASMKRVRKLTKMSENVALGVLSGVVKVSGFFTSSVVNSKPGKKLFSLLPGEIVLATLDGFNKVCDAAEVAGRNVMSTSSVVTTGLVTHKYGEQAGEVTNEGLSAAGHAFGTAWAVFKLRKALNPKSVIKPTTMAKAAAQASSTQLKAKK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01046 375 PANTHER SPARTIN 11 372 IPR045036 -
Vifa6g01046 375 Pfam Senescence domain 177 364 IPR009686 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01046 Vifa-Chr6 344770254 344771697 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01046 K19366 - gmx:100802385 494.582