Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01043 ATGGATGATCCCAACAACAAAGGTAACAATTCATCTCTTCACGACTCTCCACCTTCTTCATCTTTCTTATCACAACCTTTCTTACCCAAAACCCCAATCTCAACATACCCATCCTTAGAAGACCATGATTCCCAACAAGAATCTGACTCAAATCAACAGTATCTCCACATCTCATACAATCACGGTCCTCGTTCCTTCAAAGACCTTCCTTTTCTTATCCTCTTCCTCCTCTTCGTTCTCTCCACTTTCGCTTTCGGAATCTTCTCTATTTTCCATAGAAACAACCACTCTACTATCTCTTCTTACACCTATGATTCTAACACCACCTCATGCACTATCATCAACCCTTCCCTTTCAATTTCATCACCCTCTTCTTCCACTTTTCTCTCTTCATCTTCCCCTTTTGTGAAGGATTTAACATGGACGCTTGTTATCACTTTTGTTATAAGCCTACCCATGTGCTGGTCACTTCTTCTCTTACTCAAGCATTACACCAAACACCTTGTCTACGCTTCGATTCCTTTCTTTATCGTCATCCCAATTTTCCTTAATGTTTACTGGTTTGTTGCTTGCACTCTCGAAACCTCTTGTAGTGATGCTTTTCCTCTGGTGTATAGAATTTTGGTGTTGGGTTTTGTTTTTTTGGTGATTGGTGTGATTGTGTGGATACTTGTTGTGAATTGGCACCGTGTGGAGCTTACTGTGAGAATAATTGGGGTTGCTTCTGATGCACTTTCTTGGAATATGGGTTTGTTTGGGGTGCTTCCTTGTTTGACAATTGGGCTTTTTGTGTATTATGTGCCAATTGTGGTGTTTTTGGTGTTGGCTAAGTATAATGGTAAGGTTGTGCCTAAGAAATTGCATAGTGGATATGGTTGTGTTTGGAAGGAGGATTCTTGGGTGCCAGCTTATTTTGCATTGGCGATACTTACTATGTTGTGGTCAGCAGCAGCTATGCTTGAAGCCCGGGTTTATGTCATTAGTGGGACTATTGCTCGTTGGTATTTCTCCAAGGATTTAGAGACTCCTACAAAGAGCCTTAGAACTTCTCTCAGAAATGCTTTTGGTCCTTCATCTGGAACAGTATGTTTGTCGGGATTGCTTGTCTTTGTTGTTCGAGTGGTGCGCTTCGTGGTTGATAATGCAAGACAAGAGGGTACTCCTGGGCTAGTGAACATTGTTTTACGGTGCTGTGTAAATGCCATACTCACAGCTGTCGATTTTCTCAATAAGTTTACCATTAACTTTGCTGCAATAACCGGTGAAGCTTACTGCTCATCAGCAAGGATGACATATGAACTTCTTAGACGTAACCTTCTCTCTGCTGTTTTTGTGGAGACCATATCATCCCGCCTTCTGGTTGGAATTGTTTTTGTCCTATCAGCAATATACACAATTGTGGCCTGTGTTATCTTAAAAGCTGCAACCAATCTCGGGTCTGATGCATATTTTGTGGCAGCAGCAGCATGGCTTCTACTGATCGTAGTCCTGGGTTTCCTTGTGCATGTGCTCGACATTGTAATCGATACGATATATGTCTGCTACGCGATAGACAGGGACAGAGGAGAGGTTTGTAAACAAGACGTTCACGAGGTTTACGTTCACTTACCTATAAGTAGAAGTATGAGACAATCTAATATTACAAGAACTCTAGGTGTATAA 1662 0.4164 MDDPNNKGNNSSLHDSPPSSSFLSQPFLPKTPISTYPSLEDHDSQQESDSNQQYLHISYNHGPRSFKDLPFLILFLLFVLSTFAFGIFSIFHRNNHSTISSYTYDSNTTSCTIINPSLSISSPSSSTFLSSSSPFVKDLTWTLVITFVISLPMCWSLLLLLKHYTKHLVYASIPFFIVIPIFLNVYWFVACTLETSCSDAFPLVYRILVLGFVFLVIGVIVWILVVNWHRVELTVRIIGVASDALSWNMGLFGVLPCLTIGLFVYYVPIVVFLVLAKYNGKVVPKKLHSGYGCVWKEDSWVPAYFALAILTMLWSAAAMLEARVYVISGTIARWYFSKDLETPTKSLRTSLRNAFGPSSGTVCLSGLLVFVVRVVRFVVDNARQEGTPGLVNIVLRCCVNAILTAVDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRLLVGIVFVLSAIYTIVACVILKAATNLGSDAYFVAAAAWLLLIVVLGFLVHVLDIVIDTIYVCYAIDRDRGEVCKQDVHEVYVHLPISRSMRQSNITRTLGV 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01043 553 Pfam Plasma-membrane choline transporter 213 520 IPR007603 GO:0022857|GO:0055085
Vifa6g01043 553 MobiDBLite consensus disorder prediction 1 47 - -
Vifa6g01043 553 MobiDBLite consensus disorder prediction 1 41 - -
Vifa6g01043 553 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 44 519 IPR007603 GO:0022857|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01043 - - tpra:123913083 882.093