Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01024 ATGGGATCTCAGGTCTCGAGACAAATCGAAAAACGAAAGGAAATCCAAGCAGAAGAGAAAACTCTTTCTGATCTAAAAAGCTTAGGAGAAAACTACCCTGGTTCTGATTACTACCCTTCAGACAGAAAAAACTGGATGTCAAATCTCAACCATCACAAACTCAAGATCAACATGATTGTTTGGCCTGGAACACATGATTCCGCAACGAACAAAATCGGTATACCGGGAATCACTCGCCCTTTCGCGCAATGCCAAACTTTGTCCATCTACAATCAGCTTGTGAGAGGAACAAGAGTGTTTGATATTCGCGTGCAAGAGAATCAAAGAGTATGTCACGGAATTATCGTAACATACAGCATAGACATTGTCATTAGAGACGTAAAAAAGTTCTTATCAGAAACCGAATCCGAAATCTTAATCCTCGAGGTTAGAACCGAGTTTGGTCATAATGATCCACCGGAATTCGACAAGTACCTCGAAGAAAACTTAGGCGAGTACTTAATTCACCAAAACAATGCTGTTTTTGATAAGACTATTTCTGAGGTGCTACCGAAAAGAGTTATATGCGTTTGGAAACCGAGAAAATCGGCACAACCAAAGGCGGGTAGTAGTCTTTGGAGTGCAGGCTATCTAAGGGATAATTGGATTAATACAGATTTGCCTTTGACAAAGTTTGAAAGTAATATGAAGTATTTGAGTGAACAGGAACATGTTGTGTCTAGAAAATACTTTTATAGAGTTGAGAATACTGTTACGCCGGTTCCTGATAACCCGATTGTGTGTGTAAAACCTGTGACAGAACGGATTCATGGATATGCAAGACTCTTTATTAGTCAGTGCTTTTCTAAAGGGTGTGGTGATAGATTGCAGATATTTTCTACAGATTTTATAGACTTGGATTTTGTTGATGCATGTGTTGGACTCACCCATGCAAGGGTTGAGGGTAAAGCATGA 954 0.3973 MGSQVSRQIEKRKEIQAEEKTLSDLKSLGENYPGSDYYPSDRKNWMSNLNHHKLKINMIVWPGTHDSATNKIGIPGITRPFAQCQTLSIYNQLVRGTRVFDIRVQENQRVCHGIIVTYSIDIVIRDVKKFLSETESEILILEVRTEFGHNDPPEFDKYLEENLGEYLIHQNNAVFDKTISEVLPKRVICVWKPRKSAQPKAGSSLWSAGYLRDNWINTDLPLTKFESNMKYLSEQEHVVSRKYFYRVENTVTPVPDNPIVCVKPVTERIHGYARLFISQCFSKGCGDRLQIFSTDFIDLDFVDACVGLTHARVEGKA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01024 317 SUPERFAMILY PLC-like phosphodiesterases 41 308 IPR017946 GO:0006629|GO:0008081
Vifa6g01024 317 PANTHER UNCHARACTERIZED 32 310 - -
Vifa6g01024 317 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 309 IPR017946 GO:0006629|GO:0008081
Vifa6g01024 317 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 56 184 - -
Vifa6g01024 317 CDD PI-PLCXDc_plant 32 312 - -
Vifa6g01024 317 Pfam Phosphatidylinositol-specific phospholipase C, X domain 81 173 IPR000909 -
Vifa6g01024 317 SMART plcx_3 50 192 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01024 Vifa-Chr6 335390565 335391518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01024 1 317 Acyl Lipid Metabolism Gene Families AT4G38690 72.013 6.69e-179 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01024 - - gmx:100789013 527.709