Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00977 ATGGCTTCCGCATCCTCCAAAACCCTAACCGATTTTTTCAACCGAGCTCCCAAACGCTTGAAACCCACTCTCACCACTATCTGCAAATCCGAAGATAACACCAATGCCTCCTCCACCCTCTCAGTCGACCAAAAATCGCGCATCGAATTCAATAAGAGCCTCGCTCTCTCCAAAAGAAACCTCAAAATCTGCACCGAAAGGATTTCCAAACACAAAGAATCTTTAGTTGGGGGATGCGTGAAACTAGAAAAGTTGCTTGTGGAGGAATCGTGGTTGGAGGCTTTATCCGGAGAATTTCAGAAGTCTTATGTGGTTAATCTCTCGGAGTTTGTTGAAACGGAGATTTGTTCTACTAGAGATGATTCTGTGTATCCTCCTCAGCATTTGATTTTCAATGCTCTTAACACTACTCCTTTTCATTCTGTTAAGGCTGTGATACTTGGCCAGGATCCTTATCATGGACCTGGTCAAGCAATGGGGCTTTCATTCTCGGTGCCCGAGGGAATCAAACTTCCATCTAGTTTGGTAAATATATTCAAGGAGCTTAAGCAAGATCTTGGCTGTTCAATTCCATCTCAGGGTAATCTTGAAAAATGGGCTGTGCAGGGCGTTCTCTTACTCAATGCTGTTCTCACAGTCAGGAAGCACCAAGCAAATTCTCATGCAAAAAAAGGCTGGGAACAATTTACTGACGCTGTTATCAAGACAATCTCGCAGAAGAAGGAAGGGGTTGTGTTTCTGTTGTGGGGAAAGTCTGCTCAGGATAAACTTAGGTTAATTGATGCAACCAAGCACCACATTCTAAAAGCTGCACATCCTTCTGGTTTATCTGCACACAGAGGCTTCTTTGGCTGCAGGCACTTCTCTCAAACTAACCAGCATCTGAAGCAAATGGGGATAAGTCCCATAGATTGGCAACTATAG 924 0.4405 MASASSKTLTDFFNRAPKRLKPTLTTICKSEDNTNASSTLSVDQKSRIEFNKSLALSKRNLKICTERISKHKESLVGGCVKLEKLLVEESWLEALSGEFQKSYVVNLSEFVETEICSTRDDSVYPPQHLIFNALNTTPFHSVKAVILGQDPYHGPGQAMGLSFSVPEGIKLPSSLVNIFKELKQDLGCSIPSQGNLEKWAVQGVLLLNAVLTVRKHQANSHAKKGWEQFTDAVIKTISQKKEGVVFLLWGKSAQDKLRLIDATKHHILKAAHPSGLSAHRGFFGCRHFSQTNQHLKQMGISPIDWQL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00977 307 CDD UDG-F1-like 103 305 IPR002043 GO:0004844|GO:0006281|GO:0006284
Vifa6g00977 307 FunFam Uracil-DNA glycosylase 81 307 - -
Vifa6g00977 307 NCBIfam uracil-DNA glycosylase 89 299 IPR002043 GO:0004844|GO:0006281|GO:0006284
Vifa6g00977 307 ProSitePatterns Uracil-DNA glycosylase signature. 143 152 IPR018085 GO:0006281|GO:0016799
Vifa6g00977 307 Gene3D - 70 307 IPR036895 -
Vifa6g00977 307 SMART UDG_2 135 295 IPR005122 -
Vifa6g00977 307 SMART UDG_2_a 135 295 - -
Vifa6g00977 307 SUPERFAMILY Uracil-DNA glycosylase-like 85 307 IPR036895 -
Vifa6g00977 307 Pfam Uracil DNA glycosylase superfamily 139 292 IPR005122 -
Vifa6g00977 307 Hamap Uracil-DNA glycosylase [ung]. 88 306 IPR002043 GO:0004844|GO:0006281|GO:0006284
Vifa6g00977 307 PANTHER URACIL-DNA GLYCOSYLASE 29 307 IPR002043 GO:0004844|GO:0006281|GO:0006284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00977 K03648 - gmx:100818241 479.559