Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00975 ATGATTCTTCAACAAGCTTCTCCCACTTTTCACTTCTCTCTATGTCCCTGCAACAACAACAATGGCTTTCCTTCTAATTCTCACCCCCTTTCCAAAACCATGAAGAAACGCTTCATTTCAAATTATTACTCATATCACAAATTCCGAAGAAAAAAATGGATTCTTTACTCCTCTTCACTTCACAAACAAGGTTCCACTAATTGGAACGCCAATTCCACTACAAGGGCTGCTAAAACTTTCCTACTTGATAATAGGATTTCAAATGATGAACTTGATGAAGCTAAGTTGCAAGATTCACAAGTTCAATTGCCTTCAAATTTCACTACTTTTCAAGAAGATCCGATTGTGGATAAGCTTAGAACTCAATTGGGTGTGATTCATCCGATTCCGTCGCCGCCGATTAACGGAAACATTGCGGGTTTGTTTGTGTTTTTTTTCTTTGTTGGTGTTGTTTTTGATAAGCTGTGGAATTTTAGGAAGAGGAGAAACAAAGTTAGTAGTAGCGAGGATAGTTTTCGGGGTGTGTGGCCTCAAGTGCCTACTAGTTTTTCTTTGTTTTTGGAGAAGGATTTGCAGAGGAAAGAGTCGGTTGAATGGGTGAATATGGTTTTGGGGAAGTTGTGGAAGGTTTATAGAGGTGGACTTGAGAATTGGGTTATTGGGTTGCTTCAACCTGTTATTGATGATTTAGAGAAGCCTGATTATGTTGAAAGAGTTGAGATTAAGCAGTTTTCATTAGGGGATGAACCTTTATCGGTTAGGAATGTTGAACGCAGGACGTCTCGGCGTGTCAATGATTTGCAGTACCAAATAGGCCTTAGGTATACTGGAGGTGCCCGCATGCTGTTAAGTCTTTCTCTTAAATTTGGCATTATTCCAATCGTTGTACCAGTTGGTGTTCGAGATTTTGACATTGACGGTGAACTTTGGGTAAAATTGCGACTAATACCAACAGAACCTTGGGTCGGTGCTGCTTCATGGGCTTTTGTTTCACTTCCAAAGATCAAATTTGAGCTGTCTCCATTCCGTTTGTTCAATTTAATGGCAATTCCAGTTCTCTCAATGTTTTTGACCAAACTTCTTACAGTAGATTTACCTAGACTATTTGTACGGCCAAACAAAATTGTTTTGGATTTCCAGAAGGGAAAAGCTGTTGGTCCTGTCACTGTTGGCCCCGTCGCTGATGGTGTTAAAGATGGAGAAATGCAAGAAGGAAACATGGATTCTGTTGGTGAATTATCTGTCACTCTAGTAGATGCTAGAAAGCTTCCTTTTCTTTTTGGAAAGACAGATCCTTATGTTATTCTTAGCCTTGGAGATCAAACCATACGTAGCAAAAAGAACAGTCAAACTACTGTCATTGGTCCCCCTGGAATGCCAATTTGGAATCAGGATTTTCATATGCTTGTTTCCAACCCTAAAAAGCAGAAGTTAAATATCCAAGTAAAGGACGCACTGGGATTTGCAGATTTGAGTATTGGTACAGGAGAGGTTGATTTGGGATCTCTTCAAGATACAGTACCAACAGACAGAATTGTGGTTTTACAAGGGGGTTGGGGTTTTAGAGGAAAGGGCTCATCTGGGGAGATATTGCTTAGACTAACATATAAAGCCTATGTGGAGGATGAGGAAGATGACAAGACCGAAGAGGATTCCATTGATACAGATGCTTCAGATGACGAGTTGTCTGATACCGAAGAAGCAAATGTCACTGATCAAAAGGGTGTAAGAGATGCCATGTACCAAACAGATAAAGAATCATTTATGGATGTTTTGGCTGCAATAATTGTTAGCGAAGAATTTCAAGGGATCGTAACATCTGAAGCTGGGCTTACCAAAGGTTCAGATAATGGCTCAAATACAGCGTCGAAAGTATCAAAATCTCCTGTTGCCAATGCGGAATCAACTCCTCCTAGTTCTAATAATTCTGAAGGTTCTGGAGGGTCAGCCTTATTTTGGCTTGCTGTGATTACTAGCATGGCACTACTAATTGCTGTCAATATCAGTGGTTCAAGTATCTTCAATCCTTAA 2031 0.4013 MILQQASPTFHFSLCPCNNNNGFPSNSHPLSKTMKKRFISNYYSYHKFRRKKWILYSSSLHKQGSTNWNANSTTRAAKTFLLDNRISNDELDEAKLQDSQVQLPSNFTTFQEDPIVDKLRTQLGVIHPIPSPPINGNIAGLFVFFFFVGVVFDKLWNFRKRRNKVSSSEDSFRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGLENWVIGLLQPVIDDLEKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLSLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAASWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTVDLPRLFVRPNKIVLDFQKGKAVGPVTVGPVADGVKDGEMQEGNMDSVGELSVTLVDARKLPFLFGKTDPYVILSLGDQTIRSKKNSQTTVIGPPGMPIWNQDFHMLVSNPKKQKLNIQVKDALGFADLSIGTGEVDLGSLQDTVPTDRIVVLQGGWGFRGKGSSGEILLRLTYKAYVEDEEDDKTEEDSIDTDASDDELSDTEEANVTDQKGVRDAMYQTDKESFMDVLAAIIVSEEFQGIVTSEAGLTKGSDNGSNTASKVSKSPVANAESTPPSSNNSEGSGGSALFWLAVITSMALLIAVNISGSSIFNP 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00975 676 MobiDBLite consensus disorder prediction 542 577 - -
Vifa6g00975 676 Gene3D C2 domain 399 539 IPR035892 -
Vifa6g00975 676 ProSiteProfiles C2 domain profile. 398 513 IPR000008 -
Vifa6g00975 676 MobiDBLite consensus disorder prediction 543 566 - -
Vifa6g00975 676 CDD SMP_SF 215 378 - -
Vifa6g00975 676 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 70 676 - -
Vifa6g00975 676 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 411 538 IPR035892 -
Vifa6g00975 676 Pfam C2 domain 411 506 IPR000008 -
Vifa6g00975 676 SMART C2_3c 412 512 IPR000008 -
Vifa6g00975 676 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 193 380 IPR031468 GO:0008289
Vifa6g00975 676 MobiDBLite consensus disorder prediction 609 645 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00975 411 547 Acyl Lipid Metabolism Gene Families AT4G13550 30.714 2.67e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00975 - - gmx:100817508 938.332