Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00901 ATGGGGAAGCCTTTGATTTATGAGATCTTGGAAAAACCAGCAACGAGTTGTATTATAGGAATATGTAGTGCAATTTGGTTTTATATACAGAAGAAAAACATTGGTTATTCACATGTTGGTCTGAGTTATGAGACTGCAATTGAAGGACAATACTGGAGAATAATCACTTCTGCATTTTCTCATATAAGTATAATTCATCTTGTTTTCAATATGAGTGCATTATGGAGTCTTGGTGTGGTTGAGCAATTGGATCATGTTGGTCTTGGTGTTGAGTATTATTTGCAGTATACACTTGTGTTGGTTGTTGTATCAGGAGTGTTGGTTCTGGCAATGTATCATTTGTTGATTCAGAGATTCAAGGTTGAGTATTTTCGTCGAGTGACTGCTGTTGGTTATTCGTGTGTTGTTTTTGGTTGGATGACGATTCTTTCCGTGAAACAGCCTTCTTCGAAGCTGGATCTCTTTGGCCTTCTTTCGCTTCCTATTAGTTTTGCTCCGTTTGAATCGCTTATTTTCACTTCGATTATTGTTCCTCAGGCAAGTTTTATTGGTCATTTATCTGGTATTGTTGTTGGATATGCTATAGCTTGGGGTTTGATTCATGGGATGACGAATTATTGGGCTCTTTCGTTATTCGGTTGGATTGTTCTTGTCTTTGTTTTTAGTTTGAAAAAATCTGGTGCACTTGACCTCAACTTCATTGAGATTGAATCTGTTACTGATCCTTTGTTGCCGTCTGTACGGTTTTTGCCATCTGGCAATGGCAGAACCCTGCAGATGAATGCATTGCCCGATGGAAATGTTGAAATTGTCTAA 816 0.3811 MGKPLIYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGQYWRIITSAFSHISIIHLVFNMSALWSLGVVEQLDHVGLGVEYYLQYTLVLVVVSGVLVLAMYHLLIQRFKVEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGLLSLPISFAPFESLIFTSIIVPQASFIGHLSGIVVGYAIAWGLIHGMTNYWALSLFGWIVLVFVFSLKKSGALDLNFIEIESVTDPLLPSVRFLPSGNGRTLQMNALPDGNVEIV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00901 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016020
Vifa6g00901 271 PANTHER RHOMBOID PROTEASE 15 210 - -
Vifa6g00901 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Vifa6g00901 271 FunFam RHOMBOID-like protein 13 9 201 - -
Vifa6g00901 271 Gene3D - 10 199 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00901 Vifa-Chr6 306637156 306637971 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00901 - - gmx:100818954 487.263