Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00897 ATGGATTTGGAATCGGTTGGAGATTTAGCGATTCACATGATTATGGAAAATCTAAAACCCGAAGACATTGCCACAATTTCCTGTGTCAGCAACAGGTTTAGGTCTTTCACTTCCGACGACACTCTCTGGTTCAAAATCTGTTCCACTGAACTCTCTCTCACTCAACCGATTGATCATCTCGGAAACCCTCTCCCTTCCTTCAAGGAAGCTTATCAAACATGGAGAGAAGCTTTTGTTATGTATCCTTGGTCTCTTGTTAAGCGTGTGAAAAGGTGTTGGGACAATATAAAAACCTGGCTCGCCAATAATTTTCCCGAAGCTAAGGACACTCTTTGTCAAGGTGCGTCGGAAGCCGAGATTCAAGAGTTGGAGGATGTTTTACATGTTAAATTGCCTCTTCCTACGAGGATCCTTTACCGTTTTCATAACGGGCAAGAAATCGAAAAGCTAGATCCTGATACCAACGCCTTTGGTACTAGTTTGGGAATAATTGGAGGTTACTCTTTCTATGATCATTTGGTGAATGTTTATTTATTACCTATTAGTCAAGTAATCCAAGAGACTCAGCAAATTTCGCAGAACTTAGGGTTTTTAAGAAGATCTAAGAATCTTCTTACCAATAGAGACATGATGCCGTGTGTTCCTCATAATTTGATTAGTTTGCATCATGAGTTGGACAGCGAAGAGATACAGGATGCCATGCTACTGTGGTTAGAAGAACATGGTCGCCGTTTACAACGTGGCTTTATCAAACTGCTTGATGAAGGAAATGCCAGAAGCATTAATCTTTTCCCAGAAGAATCGCCTCTCTGTTCAACTGCTGTAACCAATGGTGTGCAGGTTCGTGCCTCTGCGTTGGTTATCCCTGAGTTGGCTGATCTTCAAGATGAGGGTCAGAAGTACCTGTTTTCTTATTCCATCCGCCTGTCCTTACAACCTCAAGGATGCGTGATCAATGGAATGTCCTACAGATCTTGCCAGCTTTATTGGAGGCACTGGATCATTCATGCTAATGATGTTGTAGTATCTGATGTCGATGGAGAAGCTGTTATAGGAATGTACCCACTTTTGCGACCAGGTGATAAAGAATTTGTTTATCAGAGTTGTGCATCTCTACCAACATCATCGGGTTCCGTTGAAGGTTCCTTTACCTTTGTACCTGGGAGATTGGTAGACCCAAGAGGAGATCCATTCCTAGCTACAGTTGCACGTTTCCCTCTTCAGCTGCCAGACTATATTTACTGA 1245 0.4249 MDLESVGDLAIHMIMENLKPEDIATISCVSNRFRSFTSDDTLWFKICSTELSLTQPIDHLGNPLPSFKEAYQTWREAFVMYPWSLVKRVKRCWDNIKTWLANNFPEAKDTLCQGASEAEIQELEDVLHVKLPLPTRILYRFHNGQEIEKLDPDTNAFGTSLGIIGGYSFYDHLVNVYLLPISQVIQETQQISQNLGFLRRSKNLLTNRDMMPCVPHNLISLHHELDSEEIQDAMLLWLEEHGRRLQRGFIKLLDEGNARSINLFPEESPLCSTAVTNGVQVRASALVIPELADLQDEGQKYLFSYSIRLSLQPQGCVINGMSYRSCQLYWRHWIIHANDVVVSDVDGEAVIGMYPLLRPGDKEFVYQSCASLPTSSGSVEGSFTFVPGRLVDPRGDPFLATVARFPLQLPDYIY 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00897 414 SUPERFAMILY ApaG-like 275 414 IPR036767 -
Vifa6g00897 414 ProSiteProfiles ApaG domain profile. 273 414 IPR007474 -
Vifa6g00897 414 Pfam ApaG domain 295 386 IPR007474 -
Vifa6g00897 414 PANTHER F-BOX PROTEIN SKIP16 201 414 - -
Vifa6g00897 414 SUPERFAMILY F-box domain 11 79 IPR036047 GO:0005515
Vifa6g00897 414 SUPERFAMILY SMI1/KNR4-like 92 171 IPR037883 -
Vifa6g00897 414 Gene3D ApaG domain 270 414 IPR036767 -
Vifa6g00897 414 Pfam F-box domain 10 45 IPR001810 GO:0005515
Vifa6g00897 414 SMART fbox_2 6 46 IPR001810 GO:0005515
Vifa6g00897 414 Gene3D - 6 95 - -
Vifa6g00897 414 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00897 K10290 - gmx:100809876 645.58