Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00892 ATGGACGATCGCTTCACCGATTTGAACCCTAAAACGTGTGTGGTTTTAGGCGGAAGAGGATTCATAGGAAAATCGTTGGTTTTGCGACTGTTGAAACTCGGTAATTGGATCGTCCGAGTTGCCGATTCCACTCACTCACTCCAACTTCACCACTCCGAGTCACTCCTCGCCGAAGCTCTCTCTTCTTCCCGCGCTTCGTACTTCCATCTCGACATTACCGATAAACACCGTGTCGCCAAAGTTCTTGAAGGTTCTTCCGTTGTTTTTTATATGGATGTTGATGGCATCAGTTATGACAATGATTTCTACAGCTGCTATAAGCTGATAGTTCAAGGTGCGAAGAATGTGATTAATGCTTGCAGAGAATGTAAAGTGAAACGTCTGATATACAACAGTTCTGCAGATGTTGTGTTTGATGATTTGCATAATGGAGTTAAAACGTCAGCATATCAGTGGAAAGTTGATGACATGTTAATAGACCTTAAGGCTCATGCAGAAGCCTTGGTCTTGGATGCCAATGATATTGATGGAGTGTTGACATGCTCACTTCGTCCTAGTAATGTCTTTGGTCCTGGTGACACAGAACTCGTGCCATATTTTCTCAAGTTAGCAAGATATGGTTTCACAAAGTTTATTATAGGGAATGGTGATAATCTGTCAGACTTCACCTTTTATGAGAATGTTGCTCATGCCCATATCTGTGCAGAAGAAGCCTTAAATTTCCAAACAGTCTCTGTGGCTGGAAAGGCATTTTTTATCACGAATCTTGAGCCTATGAAGTTTAGGGAATTTCTCTCACTTTTATTGGAAGGTCTTGGATACCAAAGGTATGAATTGGAACTTGTTTTTGTAATGATGACATAA 864 0.412 MDDRFTDLNPKTCVVLGGRGFIGKSLVLRLLKLGNWIVRVADSTHSLQLHHSESLLAEALSSSRASYFHLDITDKHRVAKVLEGSSVVFYMDVDGISYDNDFYSCYKLIVQGAKNVINACRECKVKRLIYNSSADVVFDDLHNGVKTSAYQWKVDDMLIDLKAHAEALVLDANDIDGVLTCSLRPSNVFGPGDTELVPYFLKLARYGFTKFIIGNGDNLSDFTFYENVAHAHICAEEALNFQTVSVAGKAFFITNLEPMKFREFLSLLLEGLGYQRYELELVFVMMT 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00892 287 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 248 - -
Vifa6g00892 287 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 275 IPR036291 -
Vifa6g00892 287 Gene3D - 9 284 - -
Vifa6g00892 287 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 278 IPR002225 GO:0003854|GO:0006694|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00892 Vifa-Chr6 305073260 305075287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00892 12 274 Lipid Metabolism Gene Families AT2G33630 30.742 4.62e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00892 K23558 - vum:124823132 426.787