Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00885 ATGAATTCAGTTCCTTTTCAATCTGCACCACTTCTTGAACCTATGCAGTTTCCAGTATTACCACCCGAACCACCAAATTCAAGTTCCTTTTGGGAGACCAGAAATGTTTGCGATCGGTTCCGGGAATTGCAGGATACGCTAAATCTTGTAAAGGGAATGCAAAAGGAACTAGAGATGTTGAAGATGATAAGAGACCGTGAAGGGTCTTTAGAGGGTTTAACTCATGGCTCAAACGGAACTTACCTTTTGAGTTTTCTAAAGTGTTTAGAGGACAGAGGGGTTAGTGTAGAAACCCAAGAAGCATTAGCTATTGAAACGGCCAATGCTTTGATGTTAAAACTAAGAGCGCAGCTGGAGCCATTTAGATATGTTGCAGATGAAGCAAGTCCATGGGAAGAGAAATCAGCAGTGGCTAGGTTTACAAGTAAAGTGCATAAGTCTAAACGGAATCAACTCTGGAGGAAGAGAAAAAGGAAGCGTATCGCGGAAATAACGGCAAAGGACCACGAGCGATTCGCCCAAATTGACCAGGAAGCTGATGAATGGAGGGCTAGGGAGATTGCCAAGGAAATTGCAGATAACAAGGTCAAAAAGATGAAAGAAATTGCAAAGCTTAAAGTCAAAGAAGAGAAGAAGAAACTAGAGTCTGAGCTGGAGCTGCTCTTGGTGGTGGAGAAACTTCAAGAATTACGCTCCATAAGGATACAAAAGTTAAAAAAACAAGGCCATTTTCTCCCAGAGGAGGATGACAGGTTTCTTGAGCGAGTTCAGGCTGCAGTGGAAGAAGAGGAGCGTGAAGCTTTGGCAGCAGCTGAAACAGATGCTGCTAAAGACGCAATTGCAATTGCCGAGGAATCCAGAAAAGCTATGCAGAACCAAGAGAAACTTTCAGATGGAAGCAATGATGAAAGTCAAATTAAGGAGAAAAAAGAGGAAATAGTCCATAGTGTAACTGAAGAGGGATTTGATGCAACTGATGAGAAGAAATCTAGTAAAATAGCATCTGAAGAACAGAACTATAGAGGGGCTTATGATCCTTTGGCCAATTTGCCAATGGAGTTCTATCATTATTATCATGGAAGCAACAATGACATGGGCACATTGATCGAGGTTAGAAGAGGATGGGACGCCTATATCCGACCGGGAGGAAGTCGCATACCTGGACACTGGGTTCAGCCTCCTCCTCCAGCCAATGAGATATGGGCATCTTACTTGGTGAGGTCTAAATGA 1230 0.4309 MNSVPFQSAPLLEPMQFPVLPPEPPNSSSFWETRNVCDRFRELQDTLNLVKGMQKELEMLKMIRDREGSLEGLTHGSNGTYLLSFLKCLEDRGVSVETQEALAIETANALMLKLRAQLEPFRYVADEASPWEEKSAVARFTSKVHKSKRNQLWRKRKRKRIAEITAKDHERFAQIDQEADEWRAREIAKEIADNKVKKMKEIAKLKVKEEKKKLESELELLLVVEKLQELRSIRIQKLKKQGHFLPEEDDRFLERVQAAVEEEEREALAAAETDAAKDAIAIAEESRKAMQNQEKLSDGSNDESQIKEKKEEIVHSVTEEGFDATDEKKSSKIASEEQNYRGAYDPLANLPMEFYHYYHGSNNDMGTLIEVRRGWDAYIRPGGSRIPGHWVQPPPPANEIWASYLVRSK 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00885 409 Coils Coil 197 224 - -
Vifa6g00885 409 PANTHER PROGRAMMED CELL DEATH PROTEIN 7 1 408 - -
Vifa6g00885 409 MobiDBLite consensus disorder prediction 300 335 - -
Vifa6g00885 409 MobiDBLite consensus disorder prediction 287 337 - -
Vifa6g00885 409 Coils Coil 253 293 - -
Vifa6g00885 409 Pfam Programmed cell death protein 7 126 405 IPR031974 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00885 Vifa-Chr6 304417427 304420767 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00885 - - gmx:100794292 551.206