Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00840 ATGGAGAAATATTTGGCATCGAAAAAGCCTTGTAGAGAACGGATTAAGCTTCCTCTTAGGTTTCGTTGGAAGACGAGTTTGGTTGAATTGAATGGGAAATTTGAGGCGAACTATCGTCATGAGATGATGAACTTGCTTATGCGTTCGTATTCTGAGGTTGGATCTTTTCAGCATGTGTATAGTAGGGAAAATGGGACAATTTGCTCCTCTAATATTAATCAAATGCTCACCGAGGCACATACTGAGGGTAATCTTTTATATAGAAGAAGGAACGGTGTAACTTCTGTAGACTTTGACAACAAGGGGATATACTTGGCGTCTGTCACGAAATCAGGTTGCTTAACAGTTCATGACTTTGAAGCTCTTTATTGCCGGACAAACAAATTAACTTGCTTGCAAGAAGACCAGAGCAAACTTTTACTGCACCTCTCACCTGATCACCAACTTGATGTTGTCAAATGGAATCCTCTTGACCAGAATGAGGTTCTTTGTGCCTCTATGAATAGTAATGTACTACTCGTATTTGATGTTGCATATATGATGTCAGAACCAATTGATGAGTTACGTACAAGAAATCCTGCCACAGTTAGTGGATCCAACATACCCAAAGGTCTCTCTGATGTTGCTTTTGCATCAAATGATTCGAGGATATTTGGTTCTGATACGCATGGTACAGTTAATGTTTGGGATAGAAGAGCGAAGGGTCTACCCTGCCTCGAACTCACATCTCCTTCATTTGGTACCCTTAACAGCATCCAATTAGATGCAGAAAATCAGATTGTTTTTGGTGCTGGGAGGCATGGGATTGTGCATGTGTGGGATTTACGTGGTGGAAGAGCATCTACTTCATTCCTAAATCACAAAGAGATATGTCATCCACCAGTAACATCAGTGAAGTTGGCAACATTATTAGAGAAGATTGGATCCTTGAAGGCACAAGCAGAAATTGTTCCCAAGGAGATTCACTCTATTGGTCTTAATCCGTCGTTCCCAAGTCAGTTAGCATTCCATATAGCAGACGGCTGGTCGGGTATTTTGGATATTAATAATTTCAAAGTTACACATATTCATTGCCCACCTCCAGCTTGGTTAAATGATTCGTATGCTTCCCTTGATCAAATGGATTTAAGAAAACCTTCATGGTTATCGACATGTTCGATCTATTTGGCAGGGTCACCATTAAATCGCGGCCTTCATATGTTAGATTTCTATCCGAGTATCAGCTCACCTTGTCACGTGGATTACAAGGAGGATGTACCAGAATTTTCAAAACAAAAGAATCACAATAGATTCATTCCTTTAACTGGTGAAGTTTTGTCATGTGCTGCTCATCCTTTGTACAATGCCATCGTAGCAGGAACAAAGGAAACATCTTTGCTTGTGATATCCCAAAAACGTAAGTCATGCAAAGGAGAAGATTAG 1422 0.403 MEKYLASKKPCRERIKLPLRFRWKTSLVELNGKFEANYRHEMMNLLMRSYSEVGSFQHVYSRENGTICSSNINQMLTEAHTEGNLLYRRRNGVTSVDFDNKGIYLASVTKSGCLTVHDFEALYCRTNKLTCLQEDQSKLLLHLSPDHQLDVVKWNPLDQNEVLCASMNSNVLLVFDVAYMMSEPIDELRTRNPATVSGSNIPKGLSDVAFASNDSRIFGSDTHGTVNVWDRRAKGLPCLELTSPSFGTLNSIQLDAENQIVFGAGRHGIVHVWDLRGGRASTSFLNHKEICHPPVTSVKLATLLEKIGSLKAQAEIVPKEIHSIGLNPSFPSQLAFHIADGWSGILDINNFKVTHIHCPPPAWLNDSYASLDQMDLRKPSWLSTCSIYLAGSPLNRGLHMLDFYPSISSPCHVDYKEDVPEFSKQKNHNRFIPLTGEVLSCAAHPLYNAIVAGTKETSLLVISQKRKSCKGED 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00840 473 PANTHER MITOCHONDRIAL DIVISION PROTEIN 1-RELATED 88 462 - -
Vifa6g00840 473 SMART WD40_4 234 274 IPR001680 GO:0005515
Vifa6g00840 473 SMART WD40_4 424 463 IPR001680 GO:0005515
Vifa6g00840 473 SMART WD40_4 82 118 IPR001680 GO:0005515
Vifa6g00840 473 SMART WD40_4 136 176 IPR001680 GO:0005515
Vifa6g00840 473 SMART WD40_4 189 230 IPR001680 GO:0005515
Vifa6g00840 473 Gene3D - 57 316 IPR015943 GO:0005515
Vifa6g00840 473 SUPERFAMILY WD40 repeat-like 86 462 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00840 - - cam:101498313 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00840 6 288272821 288286099 Vifa6g00840 6 288272821 288286099 ECH