Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00802 ATGGAAAATCAAAATGGGCCGCATTTGGTTCTAATACCTCCACCATTCCATGGCCACATGACTCCTATGCTTCAACTAGCCACAGTCCTTCATTCCAAAGGCTTCTCCATCACCATAGCACACACCCATTTCAATTCCCCTGATCCTTCTAATCACCCTAATTTCAATTTTCTACCCTTCTTTGATGGTTTATCTAGTACCCAAATCACTTCCAAGAATTTCGTAGATATTGCTTCAACTCTAAGTACCAATTGTGTAGCTCCACTTAAGGAGACATTAATTCATCATATGGCCAAATTAGAAAAAAATGATGAAAAGATTGCTTGTATAATCTATGATGGATTTTTTCATTTCATCGATTCTTTGGCTAAGGAATTAAAGCTACCAAGTATTGTCTTTCGAACCACTTGTGCTACTAATTTTCTCACTTATCACGTGTGTGCTCACCTACAAACCAAAGGGTACCTTCCCTTGCAAGATTGTAAGTCGTTGGATTTGGTACCAGAACTGGAGTTGCTGCGATTCAAAGATCTACCTATTTTCAATTTAAGAAATCCACATGATTTCCTTCATTGCACATCTAAAAATCTTTCAATAACACCTTTAGCTGTTATTTTCAACACTATGCAAGGCTTAGAAGATTCATCACTAATTCAACTCCAGCAGCTACACAAATTAGGTGTAACAGAGAGGGGTTGGATTGTGAAATGGGCACCTCAAAGTGAGGTTTTGGCACATGAAGCTGTTGGAGGTTTTTGGAGTCATTGTGGTTGGAATTCAATATTGGAGAGTTTGTGTGAAGGAATACCAATTATTTGTCAGCCCCATTTTGGAGATCAAAGGGTAAATGCTAGATTGTTGAGCCATGTTTGGAAGGTGGGTTTGGAATGGTGTAATGTGATGGAAAGAGATGAGATTGAAAAAGTGGTAAGAACACTTATGGTGAATCAAGAAGGGGAAGAATTGAGAGAAAGAGCAACTGAATTGAAGCATGAGATTAGATTGGCTACGAATGGTTCTTCCTCGGATGCATTAAATGGGTTGGTAAAATGCATCTTGTCAATAAAAATGTCTCATTAG 1080 0.3833 MENQNGPHLVLIPPPFHGHMTPMLQLATVLHSKGFSITIAHTHFNSPDPSNHPNFNFLPFFDGLSSTQITSKNFVDIASTLSTNCVAPLKETLIHHMAKLEKNDEKIACIIYDGFFHFIDSLAKELKLPSIVFRTTCATNFLTYHVCAHLQTKGYLPLQDCKSLDLVPELELLRFKDLPIFNLRNPHDFLHCTSKNLSITPLAVIFNTMQGLEDSSLIQLQQLHKLGVTERGWIVKWAPQSEVLAHEAVGGFWSHCGWNSILESLCEGIPIICQPHFGDQRVNARLLSHVWKVGLEWCNVMERDEIEKVVRTLMVNQEGEELRERATELKHEIRLATNGSSSDALNGLVKCILSIKMSH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00802 359 Gene3D Glycogen Phosphorylase B; 4 227 - -
Vifa6g00802 359 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 230 343 - -
Vifa6g00802 359 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 354 - -
Vifa6g00802 359 Gene3D Glycogen Phosphorylase B; 228 336 - -
Vifa6g00802 359 CDD GT1_Gtf-like 7 345 IPR002213 GO:0008194
Vifa6g00802 359 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 233 317 IPR002213 GO:0008194
Vifa6g00802 359 FunFam UDP-glycosyltransferase 76C1 9 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00802 Vifa-Chr6 280491258 280492588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00802 221 353 Glycosyltransferase AT2G26480 53.333 3.26e-44 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00802 - - pvu:PHAVU_011G060300g 255.758