Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00758 ATGGGAACCCCACAAAAGGAGAATGAAAGCAAGGGTTTCTTTTCCGCAATGTCTTCCCGGTTTTCTCTCTTCAGCAACGCTATGCACCGATCTGTTAACGGGCTTCTTGGATATGAAGGTGTAGAAGTCATAAACCCAGAGGGTGGTAAAGATGACGTAGATGATGAAGCTCAGAGAGGAAGATGGAAACCCGAGGAAAGAGACGGTTACTGGAAAATGATGCAGAATTATATTGGTGCAGATGTAACTTCACTGGTTACACTGCCGGTTATTATATTTGAACCGATGACTATGATTCAAAAAATAGCTGAGTTGATGGAGTACTCCCACTTGTTAGATGAAGCAGATAAATCAGACGATCCTTATATGCAGTTGGTGTATGCATCGTCGTGGGCTATATCTGTGTACTTTGCATACCAACGGACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAATTGACTAACCATAATGGAATTACATTCCTTGCGGAACAGGTTAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAACGAACATTTTACATATGACGTAACTTCGAAGTTAAAAACTAAGTTTTTGGGGAATTCTGTTGATGTGTACCCTGTTGGAAGAACGCGGGTGACCCTAAAGAGGCACGGTGTAGTCTTAGATTTGGTGCCACCTCCTACAAAGGTTAACAACTTGATATTTGGCCGGACTTGGATTGATTCACCTGGGGAAATGATAATGACAAATTTGACAACCAGAGACAAAGCCGTACTTTACTTTCAACAATGTGGATGGTTTGGTGCTGGTCGCTATGAAGTGGATGGTTATATTTATAATTCTTCTGAAGAGCCTAAAATTTTGATGACTGGGAAGTGGAATCAGTCAATGAGTTATCAACCTTGTGATTCAGAAGGAGAGCCTCTTCCAAACACAGAGTTGAAAGAGGTTTGGCATGTTGCTGATGTTCCTCCAAATGATAAATTCCAGTACACACATTTTGCCCATAAAATAAACAGCTTTGACACTGCTCCAAGAAAGTTGTTGGCATCAGATTCACGTCTACGCCCGGATAGATATGCACTCGAGATGGGCGATATGTCCAAATCCGGGGCTGAAAAGAGCAGTTTGGAGGAGAGACAGCGTGCTGAAAAGAGAGCTCGGGAGGAAAAAGGGCATAAATTTTCACCAAGATGGTTTGAATTAACTGAAGAAGTGACATCGACTCCTTGGGGTGATTTGGAAATTTACCAATATAATGGTAAGTACGCCGAACATCGGGCTGCTGCAGATAACTCTGGTAGTGTTGTTGATGATGTTGATGTTAAATCAATAGAATTCAATCCATGGCAGTATGGTGACTTGGGCACGGAATGA 1377 0.4248 MGTPQKENESKGFFSAMSSRFSLFSNAMHRSVNGLLGYEGVEVINPEGGKDDVDDEAQRGRWKPEERDGYWKMMQNYIGADVTSLVTLPVIIFEPMTMIQKIAELMEYSHLLDEADKSDDPYMQLVYASSWAISVYFAYQRTWKPFNPILGETYELTNHNGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRHGVVLDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTRDKAVLYFQQCGWFGAGRYEVDGYIYNSSEEPKILMTGKWNQSMSYQPCDSEGEPLPNTELKEVWHVADVPPNDKFQYTHFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDMSKSGAEKSSLEERQRAEKRAREEKGHKFSPRWFELTEEVTSTPWGDLEIYQYNGKYAEHRAAADNSGSVVDDVDVKSIEFNPWQYGDLGTE 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00758 458 Gene3D - 151 328 - -
Vifa6g00758 458 MobiDBLite consensus disorder prediction 372 390 - -
Vifa6g00758 458 FunFam oxysterol-binding protein-related protein 3C 151 328 - -
Vifa6g00758 458 Gene3D - 359 448 - -
Vifa6g00758 458 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 58 427 IPR000648 GO:0008289
Vifa6g00758 458 FunFam Oxysterol-binding protein-related protein 3C 359 453 - -
Vifa6g00758 458 SUPERFAMILY Oxysterol-binding protein-like 63 434 IPR037239 -
Vifa6g00758 458 Pfam Oxysterol-binding protein 70 427 IPR000648 GO:0008289
Vifa6g00758 458 ProSitePatterns Oxysterol-binding protein family signature. 167 178 IPR018494 -
Vifa6g00758 458 MobiDBLite consensus disorder prediction 364 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00758 Vifa-Chr6 269382452 269386918 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00758 - - gmx:100810228 824.698