Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00731 ATGGCTTCTTCATCTTCTTCCTCCTTAACCAACTCTCTCCTCATCACTACCTTCCTCTTCCTCACTATCTTCTCATCCTCCCACGCTCTTTTCTTCACCTTCGTTAACAACTGCCCCTACACCGTCTGGCCAGCTATCCTACCCAACGAAGGTCATCCCAACCTCGCCACCGGCGGTTTCGAACTCCGCACCTTCACCCACCGCTCCATCAACGTTCCCGACACACACTGGGCCGGTCGCGCCTGGGCCAGAACCGGCTGCTCCACCACCAACAACAAATTCACCTGCCTCACCGGCGACTGCGCCAACCGCCTCGAATGCAACGGAGCAGGCGGTTCATTGCCCGCCACACTAGTCCAATTCGACGTACATCACGGCAACAACGACTTCTCCTCTTACAGCGTCAGCCTCGTCGACGGTTTCAACACCCCACTGACGGTTACACCTCATGAAGGTAAAGGTCAGTGTCCTGTGGTTGGTTGTAAAGCAAATCTCGTTGCTACGTGTCCTGATGTTTTGCAGCACCGTGTTCCGGCGGTTCATGGTCCTGTTGTGGCGTGTAAGAGTGGATGTGAAGCTTTTCACACGGATGAGTTCTGTTGTAGGAACCATTTCAACAACCCTCAGACTTGTAAACCTACTGTGTATACGAATTTCTTCAAGCACGCGTGTCCCGAGACTTTTACCTACGCGCATGATACTCCTTCTTTGACTCATCAGTGTTCTTCTCCTCGTGAGCTTAAGGTTATCTTTTGCCACTGA 762 0.5249 MASSSSSSLTNSLLITTFLFLTIFSSSHALFFTFVNNCPYTVWPAILPNEGHPNLATGGFELRTFTHRSINVPDTHWAGRAWARTGCSTTNNKFTCLTGDCANRLECNGAGGSLPATLVQFDVHHGNNDFSSYSVSLVDGFNTPLTVTPHEGKGQCPVVGCKANLVATCPDVLQHRVPAVHGPVVACKSGCEAFHTDEFCCRNHFNNPQTCKPTVYTNFFKHACPETFTYAHDTPSLTHQCSSPRELKVIFCH 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00731 253 CDD TLP-PA 32 252 - -
Vifa6g00731 253 Gene3D Thaumatin 31 252 IPR037176 -
Vifa6g00731 253 PIRSF PR5 1 253 IPR001938 -
Vifa6g00731 253 Pfam Thaumatin family 36 252 IPR001938 -
Vifa6g00731 253 ProSiteProfiles Thaumatin family profile. 32 253 IPR001938 -
Vifa6g00731 253 SMART tha2 32 253 IPR001938 -
Vifa6g00731 253 PRINTS Pathogenesis-related protein signature 31 43 IPR001938 -
Vifa6g00731 253 PRINTS Pathogenesis-related protein signature 80 91 IPR001938 -
Vifa6g00731 253 PRINTS Pathogenesis-related protein signature 131 147 IPR001938 -
Vifa6g00731 253 PRINTS Pathogenesis-related protein signature 243 252 IPR001938 -
Vifa6g00731 253 FunFam THAUMATIN-LIKE PROTEIN 1 30 253 - -
Vifa6g00731 253 SUPERFAMILY Osmotin, thaumatin-like protein 31 252 IPR037176 -
Vifa6g00731 253 PANTHER OS03G0233200 PROTEIN 18 252 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00731 Vifa-Chr6 261845945 261846706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00731 13 252 Receptor kinase-like Gene Family AT5G38280 38.776 3.95e-48 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00731 - - cam:101503313 436.032