Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00728 ATGGGAGGGAGGGTGGATACGTCTAACTTGAGCATGAGTTCTAATTCTAAACAAAACATTGCTATCACTGGGAAAAAATCGTACGATAAACAGCTTGTTGCATCGCGTCCCAAAGGATTTGCACAGAGATGTTATGAACCCCTTGTTTCATTGAGGCATGGTGACTTTAGAACTACTGTGGGGTGTGCTGCATTATTTTTAGTTAAAGTTGCTGCTTTAGAGACTGTAAGGAGGTTCTCCAAGAATAGATGCCCGTGTGTGTGGCAAGGCCTGCAGGGTCTACAAATCCTTGCCTACACACCAGTTCAATGGTTTCAGAAGTGGGCTACTTTCAGGAGTTTGGTCAAAAGCATGCAGGTACTATCAAAACCATTACTTGTCCTTTCCATTGCAACAGCTTTTACTGATCAACTAGAATGCAGTGATGGAACCTCAGATTATATTACTGATTCTCGTGATTCAGAAATATCTGCAGCAGAACCATCTCCTGTACAGGATAATTTGAACACTAGTCAACTCGAGAGAGCTCCTGAAGTTTTAGAATATGAAAAATGGTTGATTCAACTCGATCAAGAGCTGGAAAATCAAGGGATTAGTTTGCCTGCAAGAATCAATGATGACGAGCTCCGCAGATTTTACGCAGCTTCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAGAAGACAATACATTGGCGGGAGTATTATAAAATCCTTTCAGTAGAAGAGCTGGAAATGTGGTCAAACATGGTGTTCTGGCATGGATCTGATTTGTTGCACAGACCTTGTCTCATTGTAAGGCTTGGGATGGCTTGCAGCTTATTGGCATCCCAAGACAGACCTCAATTTGCTCAAGCAATTGTATCACAGGTAGAATATGGAGTCTTGCACTTGGTTGATAAAGACAACCCTCAAATTACAGTATTGGTGGACTGTGAAGGGCTATCTCCATTGAGAATTCCTATGCAAATTCTGAGATCTTGTTCTAACATTCTGCAAGATCATTTTCCTAATCGTCTTGGTTGTTTGTTTGTCATACGACTTCCAAAAATTGTTCGTGTTATTTTCCATACTTTTTTACAGGTTGTAAAGCCAGTTACAAAGAAAAAGTTGAAAATAGAAGGAGAGATGTACAAGAAGGTTCTTTATGACAATCTACCGACCATACCATCGTTTCTTGGAGGCGACTGCACATGTGTGACTTGTTCTAAAATGGGCAAGCAGAATATGGTGCAACCTCATGAAGCTGAGACCAGCAGCAGTAGGGTTGTTAGGGAGGACGATATCAGCGGCAACGAGGATTTGCCATCACTGTGTCTGCAGCATCCAACTATTGAATTAGATGACCATCAAAGCTATGAGAAGTTTTTGAGAACTGTTGTCATAAGTATTCTCGTATTTTGGGTTGTTTTAGCTCTCACAGTGATGGAATAA 1437 0.4092 MGGRVDTSNLSMSSNSKQNIAITGKKSYDKQLVASRPKGFAQRCYEPLVSLRHGDFRTTVGCAALFLVKVAALETVRRFSKNRCPCVWQGLQGLQILAYTPVQWFQKWATFRSLVKSMQVLSKPLLVLSIATAFTDQLECSDGTSDYITDSRDSEISAAEPSPVQDNLNTSQLERAPEVLEYEKWLIQLDQELENQGISLPARINDDELRRFYAASNNDFSCFLTSIKKTIHWREYYKILSVEELEMWSNMVFWHGSDLLHRPCLIVRLGMACSLLASQDRPQFAQAIVSQVEYGVLHLVDKDNPQITVLVDCEGLSPLRIPMQILRSCSNILQDHFPNRLGCLFVIRLPKIVRVIFHTFLQVVKPVTKKKLKIEGEMYKKVLYDNLPTIPSFLGGDCTCVTCSKMGKQNMVQPHEAETSSSRVVREDDISGNEDLPSLCLQHPTIELDDHQSYEKFLRTVVISILVFWVVLALTVME 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00728 478 SMART sec14_4 246 399 IPR001251 -
Vifa6g00728 478 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 12 475 - -
Vifa6g00728 478 SUPERFAMILY CRAL/TRIO domain 247 401 IPR036865 -
Vifa6g00728 478 Gene3D - 180 431 IPR036865 -
Vifa6g00728 478 Pfam CRAL/TRIO domain 250 396 IPR001251 -
Vifa6g00728 478 CDD SEC14 243 396 IPR001251 -
Vifa6g00728 478 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 254 402 IPR001251 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00728 - - gmx:100814843 652.899