Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00723 ATGGCTGCGAATTCTTCTAATGGAGATCAAACAACAGCTAAGCAACCTCCATTGCCATCTCCCCTGCGTTTCTCCAAATTCTTTCAGTCTAACATGAGAATCTTGGTTACTGGAGGAGCTGGATTCATTGGTTCTCACCTTGTCGATAGATTGATGGAAAATGAAAAGAATGAGGTCGTTGTTGCTGATAACTACTTCACTGGATCGAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACTGAGCCTTTGATGCTTGAGGTGGATCAGATCTACCATCTCGCATGTCCTGCATCTCCTATTTTCTACAAATATAATCCTGTGAAGACAATCAAGACAAATGTGATTGGCACTCTGAACATGCTTGGGCTTGCAAAACGAGTTGGAGCAAGGATTTTGCTTACGTCAACTTCAGAGGTATATGGGGATCCTCTTGAGCATCCTCAACCTGAAACCTATTGGGGCAATGTTAACCCTATTGGAGTTCGTAGCTGCTATGATGAGGGGAAACGTGTGGCTGAGACTTTGATGTTTGATTATCATAGACAGCATGGAATAGAAATACGTGTTGCAAGAATCTTCAACACATATGGGCCGCGCATGAATATTGATGATGGACGTGTTGTCAGTAACTTCATCGCTCAAGCATTACGTGGTGAATCCTTGACAGTCCAATCTCCAGGAACGCAAACTCGCAGTTTCTGTTATGTCTCTGACCTGGTTGATGGCCTTATCCGTCTCATGGGAGGATCAGACACCGGTCCAATCAATCTTGGAAACCCAGGTGAATTCACTATGCTTGAACTTGCTGAAACAGTGAAGGAGCTTATTAATCCAAATGTGGAGATAAAGATAGTGGAGAACACTCCTGATGATCCAAGACAGAGAAAACCAGACATAACCAAAGCTCAAGAATTACTTGGCTGGGAACCAAAGGTCAAGCTGCGCGACGGTCTTCCTCTTATGGAAGGAGATTTCCGTTTGAGGCTTGGAGTTGAGAAGAGCATCTAA 1038 0.4374 MAANSSNGDQTTAKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVVVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLMLEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQSPGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMLELAETVKELINPNVEIKIVENTPDDPRQRKPDITKAQELLGWEPKVKLRDGLPLMEGDFRLRLGVEKSI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00723 345 Gene3D - 154 338 - -
Vifa6g00723 345 Gene3D - 29 153 - -
Vifa6g00723 345 MobiDBLite consensus disorder prediction 1 20 - -
Vifa6g00723 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 27 333 IPR036291 -
Vifa6g00723 345 CDD UGD_SDR_e 32 336 - -
Vifa6g00723 345 Pfam GDP-mannose 4,6 dehydratase 35 329 IPR016040 -
Vifa6g00723 345 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 19 340 IPR044516 GO:0042732|GO:0048040|GO:0070403
Vifa6g00723 345 FunFam UDP-glucuronic acid decarboxylase 6 31 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00723 Vifa-Chr6 261674721 261678004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00723 29 328 Miscellaneous Gene Families AT1G02000 24.478 3.79e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00723 K08678 - gmx:100782830 655.595