Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00704 ATGTCGGTGAATTTGAGTTCGAGAGGAAGAACAGTAACCCGAGAAACCAGTCCAGAGAGAACCAAAGTTTGGATCGAACCAAAGCCCAAAACGAACAGAAAAGTTTCCGTCGTTTACTACCTCTCCCGTAACGGCCAACTCCAACACCCTCATTTCATGGAAGTTCCTCTTTCTTCATCTCACGGACTCTACCTCAAAGACGTAATCATTCGCTTGAACTTGCTTCGTGGGAAAGCCATGGCTACTCTGTACTCATGGTCCTCTAAAAGGAGTTACAAGAACGGTTTCGTTTGGCATGATTTATCCGAGAACGATTTCATATATCCAACGCAAGGTCAAGACTACATTCTCAAAGGATCTGAGATTCTGGATCACGTTGCTCCCACCGATCCAACGCCGTTTGAGGAAGAATCTGATTCTCCAGTGATGATTAGCCGGCGGCGTAACCAATCATGGAGTTCGATTGACTTAAACGAGTACCGAGTTTATAAGTCAGAATCGTTGGGTGACTCAGTTGGAAACATCGCCGCGGATGCGTCGACTCAGACGGAGGAGAAACGGAGGAGGAGAAGAGTTGTGAGAGAGAAGGAAGATGAAGATGAAGATGAAGATGAGAAAGGGAAGAATGAAATTGAAAATCAAGAAGTTGAAACGGTCCCACACGTTGAGTGTAATGAAAATCAGAGTACGGAGCTGAGTAGGGAAGAGATCTCGCCTCCACCGTCGGATTCGAGTCCAGAAACATTGGGGACACTTATGAAGGTAGATGGACGGCTGGGATTACGATCTGAGGTTATCGCAAAAGAGAATCCGACGGTTGAAAGCTGTGCTAGTGGAAGGATGAAAGCTTCATCAGTACTCTTGCAGTTGTTATCGTGCGGTGCGGTTTCTTTCAAGGAGAGTGTGAGTAAAGATCAAGGGTTCTCATTACTCGGGCACTACAAGTCCAGATTACCCCGCGGAGCAGGGAATCATGAGGGTAAAGAAGTAGGGACATTGATGGAAATTCCTGAATTGAGCAGAGTGAGACTGGAAGATAAAGAGTATTTTAGTGGAAGCTTGATTGAAACCAAAAAAGTGGAAGCTCCTCTTGCATTCAAAAGGTCCTCTTCTTACAATGCTGATAGTGGTTCCCGGTTGCAAATCATTGAGCATGAGGAAGATACAGTGCGAGCAAAGTGCATACCAAGGAAATCCAAGACACTAGCAACAAAGAAAGAAGATGGTACTTCAAGTTCCATGGATAGAGTTAGCCGTAGCCAACATGGAAGCAAAAGATTCGAGGGATAA 1290 0.4535 MSVNLSSRGRTVTRETSPERTKVWIEPKPKTNRKVSVVYYLSRNGQLQHPHFMEVPLSSSHGLYLKDVIIRLNLLRGKAMATLYSWSSKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEILDHVAPTDPTPFEEESDSPVMISRRRNQSWSSIDLNEYRVYKSESLGDSVGNIAADASTQTEEKRRRRRVVREKEDEDEDEDEKGKNEIENQEVETVPHVECNENQSTELSREEISPPPSDSSPETLGTLMKVDGRLGLRSEVIAKENPTVESCASGRMKASSVLLQLLSCGAVSFKESVSKDQGFSLLGHYKSRLPRGAGNHEGKEVGTLMEIPELSRVRLEDKEYFSGSLIETKKVEAPLAFKRSSSYNADSGSRLQIIEHEEDTVRAKCIPRKSKTLATKKEDGTSSSMDRVSRSQHGSKRFEG 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00704 429 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 11 421 IPR010369 -
Vifa6g00704 429 MobiDBLite consensus disorder prediction 1 20 - -
Vifa6g00704 429 MobiDBLite consensus disorder prediction 174 250 - -
Vifa6g00704 429 MobiDBLite consensus disorder prediction 220 249 - -
Vifa6g00704 429 MobiDBLite consensus disorder prediction 394 429 - -
Vifa6g00704 429 MobiDBLite consensus disorder prediction 181 197 - -
Vifa6g00704 429 PIRSF UCP031043 3 421 IPR021182 -
Vifa6g00704 429 Pfam Protein SOSEKI, plant 35 376 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00704 Vifa-Chr6 259586362 259589193 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00704 - - gmx:100803283 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00704 6 259586362 259589193 Vifa6g00704 6 259586362 259589193 ECH