Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00694 ATGAAAGCAATAGACATGTTCTGTTCTTCCCCTGCTTCAACAGCAATAATACAAACTAGTATTGATCAACGTTCTATGCTACGTCGAAGCAGAAGCACCAAAACCTACGATCATGATAGAAGGAAAAGCCAATATCAACTTCATCAAGTTCCTTGTTTATCTCAATTACCTATCAATCCTAAACCTTACTTTGAGAAGCATAGAAAGAGTTCATCTTCAGCAGATAAACAAAGCAGTACTACTGATCTTACACGTAGAAAAAGCTCAGTTGATCATGTCAGTGATTCGTCTTCAAGAAGATATCTTCTCAATGATACGCCGTTCGTCGATTGGGTATCTGAATCCAACAAAATATCGGTTCCTCAGTGTAATGCTATAGACATGTCCAATGATATGAAAGCATTGAAAAGCAACGATTCACATGCTCTTACTCTTAGCTCCAGTTCTTCAGCTATCTCCTCCAAGGACCAGGTTGTGGTTTTGAGGGTGTCATTGCACTGCAAAGCCTGTGAAGGAAAAGTGAGAAAACATATCTTAAAAATGCAAGGAGTGAGATCATTCAGCATAGAAATGGAGAAAAAGAAAGTAACAATAATTGGAGACGTGACGCCATTAGGTGTACTGACAAGTGTATCCAAGGTGAAAAGTGCACAGTTATGGCAGTCTACAACATCAGCAGTATCATCATCTTCTTCTAGGATGCACTAA 708 0.3898 MKAIDMFCSSPASTAIIQTSIDQRSMLRRSRSTKTYDHDRRKSQYQLHQVPCLSQLPINPKPYFEKHRKSSSSADKQSSTTDLTRRKSSVDHVSDSSSRRYLLNDTPFVDWVSESNKISVPQCNAIDMSNDMKALKSNDSHALTLSSSSSAISSKDQVVVLRVSLHCKACEGKVRKHILKMQGVRSFSIEMEKKKVTIIGDVTPLGVLTSVSKVKSAQLWQSTTSAVSSSSSRMH 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00694 235 MobiDBLite consensus disorder prediction 56 96 - -
Vifa6g00694 235 SUPERFAMILY HMA, heavy metal-associated domain 157 214 IPR036163 GO:0046872
Vifa6g00694 235 ProSiteProfiles Heavy-metal-associated domain profile. 156 222 IPR006121 GO:0046872
Vifa6g00694 235 CDD HMA 160 217 IPR006121 GO:0046872
Vifa6g00694 235 Gene3D - 152 225 - -
Vifa6g00694 235 Pfam Heavy-metal-associated domain 161 206 IPR006121 GO:0046872
Vifa6g00694 235 MobiDBLite consensus disorder prediction 27 44 - -
Vifa6g00694 235 PANTHER OS08G0405700 PROTEIN 6 232 IPR044526 -
Vifa6g00694 235 MobiDBLite consensus disorder prediction 24 44 - -
Vifa6g00694 235 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00694 Vifa-Chr6 256663644 256664627 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00694 - - mtr:25492466 272.707