Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00631 ATGATGTTGAAGAAGCAATCTCATCTCTTGTCCTTCTCCCTTGCACTACTAATTTCTCTTTTGTATTCCACCACCACTACTTTATCCCAATTATCACCTGCTGCTGCTCCAATACAACCTACACTACCTTCCCCCACCACGCCAGCTGCATCTCCCAAACCATTGGTACCTTCATTACCGGAATCACCTAGTGACTCCACACCTGACACCACAGCGGTTGACATAGTTGGAATCCTGAGAAAAGCCAAGTCATTCAACGTCCTAGTCCGACTCATGAAAACAACTCAATTGATCAACCAACTCAATTCGCAACTATTGACTACAAAAACAGGCGGATTAACAATTCTCGCACCAGATGACAGCGCGTTCTCAGAACTCAAAGCAGGATTCCTCAACTCTCTTTCTGATGGACAGAAACTCGAGCTCTTACAGTTCCACGTTATTTCCGACTACGTATCAAGCTCTAATTTCGATATTCTAACCAACCCAGTGAGAACACTTGCTGGAGCCAAACCAGGAAAGGTGGAACTGAACGTTGTGAGTTACGGTGGAAGTGTGAATATATCAACAGGTGAAGTGAACACTACAATCAGTGGTATTATATATACCGATAAACATCTTGCTATCTATAAAGTTGGCAAAGTGCTTCTTCCTATGGATTTCTTTTCAGTCGCTAAGGCACCCAAGAAGGGACCAACTTTGGCTCCGGAGCCTTCGGCACTGACTCCAAAAGCTGAAAAGGAAAAGCCACTATCACCAGATTCCTCTGATTCATCTCAAGCTAAGCCCACAAATGATAACTCTAGTACTGGAAAAATCAATGCGTATGGAAAGTGGATATCTTTTTTTCTTGGAGCAGTTATGTTAACTTCATTTTCTGCATAA 885 0.4294 MMLKKQSHLLSFSLALLISLLYSTTTTLSQLSPAAAPIQPTLPSPTTPAASPKPLVPSLPESPSDSTPDTTAVDIVGILRKAKSFNVLVRLMKTTQLINQLNSQLLTTKTGGLTILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDILTNPVRTLAGAKPGKVELNVVSYGGSVNISTGEVNTTISGIIYTDKHLAIYKVGKVLLPMDFFSVAKAPKKGPTLAPEPSALTPKAEKEKPLSPDSSDSSQAKPTNDNSSTGKINAYGKWISFFLGAVMLTSFSA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00631 294 ProSiteProfiles FAS1/BIgH3 domain profile. 72 216 IPR000782 -
Vifa6g00631 294 SUPERFAMILY FAS1 domain 68 219 IPR036378 -
Vifa6g00631 294 Gene3D FAS1 domain 58 218 IPR036378 -
Vifa6g00631 294 MobiDBLite consensus disorder prediction 229 272 - -
Vifa6g00631 294 MobiDBLite consensus disorder prediction 39 69 - -
Vifa6g00631 294 Pfam Fasciclin domain 84 218 IPR000782 -
Vifa6g00631 294 MobiDBLite consensus disorder prediction 254 272 - -
Vifa6g00631 294 SMART fasc_3 114 219 IPR000782 -
Vifa6g00631 294 FunFam Fasciclin-like arabinogalactan protein 11 58 218 - -
Vifa6g00631 294 MobiDBLite consensus disorder prediction 39 61 - -
Vifa6g00631 294 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 272 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00631 Vifa-Chr6 239277155 239278039 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00631 - - tpra:123919982 431.795