Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00630 ATGATGTTGAAGAAGCAATCTCATCTCTTGTCCTTCTCCCTTGCAATACTAATTTCTCTTTTGTATTCCACCACCACTACTTTATCCCAATTATCACCTGCTGCTGCTCCAATACAACCTACACTACCTTCCCCCACCACGCCAGCTGCATCTCCCAAACCATTGGTACCTTCATTACCGGAATCACCTAGTGACTCCACACCTGACACCACAGCGGTTGACATAGTTGGAATCCTGAGAAAAGCCAAGTCATTCAACGTCCTAGTCCGACTCATGAAAACAACTCAATTGATCAACCAACTCAATTCGCAACTATTGACTACAAAAACAGGCGGATTAACAATTCTCGCACCAGATGACAGCGCGTTCTCAGAACTCAAAGCAGGATTCCTCAACTCTCTTTCCGATGGACAGAAACTCGAGCTCTTACAGTTCCACGTTATTTCCGACTACGTATCAAGCTCTAATTTCGATATTCTAACCAACCCTGTGAGAACACTTGCTGGAGCCAAACCAGGAAAGGTGGAACTGAACGTTGTGAGTTACGGTGGAAGTGTGAACATATCAACAGGTGAAGTGAACACTACAATCAGTGGTATTATATATACCGATAAACATCTTGCTATCTATAAAGTTGGCAAAGTGCTTCTTCCTATGGATTTCTTTTCAGTCGCTAAGGCACCCAAGAAGGGACCGGCTTTGGCTCCGGAGCCTTCGGCACTGACTCCAAAAGCTGAAAAGGAAAAGCCACTATCACCAGATTCCTCTGATTCATCTCAAGCTAAGCCCTCAAATGATAACTCTAGTACTGTAAAAATCAATGCGTATGGAAAGTGGATATCTTTTTTTCTTGGAGCAGTAATGTTAACTTCATTTTCTGCATAA 885 0.4316 MMLKKQSHLLSFSLAILISLLYSTTTTLSQLSPAAAPIQPTLPSPTTPAASPKPLVPSLPESPSDSTPDTTAVDIVGILRKAKSFNVLVRLMKTTQLINQLNSQLLTTKTGGLTILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDILTNPVRTLAGAKPGKVELNVVSYGGSVNISTGEVNTTISGIIYTDKHLAIYKVGKVLLPMDFFSVAKAPKKGPALAPEPSALTPKAEKEKPLSPDSSDSSQAKPSNDNSSTVKINAYGKWISFFLGAVMLTSFSA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00630 294 ProSiteProfiles FAS1/BIgH3 domain profile. 72 216 IPR000782 -
Vifa6g00630 294 Pfam Fasciclin domain 84 218 IPR000782 -
Vifa6g00630 294 MobiDBLite consensus disorder prediction 254 270 - -
Vifa6g00630 294 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 272 IPR045003 -
Vifa6g00630 294 SUPERFAMILY FAS1 domain 68 219 IPR036378 -
Vifa6g00630 294 MobiDBLite consensus disorder prediction 39 69 - -
Vifa6g00630 294 Gene3D FAS1 domain 58 218 IPR036378 -
Vifa6g00630 294 MobiDBLite consensus disorder prediction 230 270 - -
Vifa6g00630 294 SMART fasc_3 114 219 IPR000782 -
Vifa6g00630 294 FunFam Fasciclin-like arabinogalactan protein 11 58 218 - -
Vifa6g00630 294 MobiDBLite consensus disorder prediction 39 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00630 Vifa-Chr6 239263802 239264686 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00630 - - tpra:123919982 427.557