Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00628 ATGGTGATGATGAAGCATCCTTTCTTCTCTCTTACACTTGTTCTAATGGTTTTTGTCTCTTCCACTACAATTCTAGCTCAGAAATCACCTGCTCCAACACCTTCAACTGATTCGGCCCCGACAGACATTATTAGAGTCCTCAAAAAGGCGGGAGGGTACACTACACTAATCCGTCTTCTCAAGACAACACAGGTATCCACCCAAATCAACTCTCAACTGTTAAACTCGAACGACGGTTTAACCTTGTTTGCAGCAAACGATAATGCATTTTCAAGCCTTAAACCTGGTTTTCTCAATTCGCTTAGCGATGAACAAAAGAACAAGCTCGTCCAATTCCACTTGCTACCTACATTTGTAGCAATATCGAATTTTGATACGCTGAGCAACCCGGTGAGAACACAGGCGGGCGATGATCCGTATAGGTTGGCGCTGAATGTAACAAGTTCAGGAAACCAAGTGAATATAACAACCGGCATTGTCAATGTCACTGTTGGTGGAACTGTTTACACCGATCACCAGCTCGCGGTTTACCAGGTAGATAAGGTGCTCCTTCCTCGGGACTTCTTTGTTGCTAAGCCTCCTGCACCGGCTCCAGCGCCTGAAAAGGCGAAGACATCGACTAAGAAGAAATCTACTGACAGCGACGAAGTTCCTAGCGGAAACGATGATTCTGGTGCTTTTACTGTGAAACAGCGGCGTCTTATGATGGTTCCTGTTGCATTTGCTACAATTATGGTAGCATTACTTTCATGGTGA 756 0.4497 MVMMKHPFFSLTLVLMVFVSSTTILAQKSPAPTPSTDSAPTDIIRVLKKAGGYTTLIRLLKTTQVSTQINSQLLNSNDGLTLFAANDNAFSSLKPGFLNSLSDEQKNKLVQFHLLPTFVAISNFDTLSNPVRTQAGDDPYRLALNVTSSGNQVNITTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKAKTSTKKKSTDSDEVPSGNDDSGAFTVKQRRLMMVPVAFATIMVALLSW 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00628 251 SUPERFAMILY FAS1 domain 38 186 IPR036378 -
Vifa6g00628 251 SMART fasc_3 81 186 IPR000782 -
Vifa6g00628 251 FunFam Fasciclin-like arabinogalactan protein 11 20 185 - -
Vifa6g00628 251 MobiDBLite consensus disorder prediction 194 225 - -
Vifa6g00628 251 Pfam Fasciclin domain 52 185 IPR000782 -
Vifa6g00628 251 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 10 229 IPR045003 -
Vifa6g00628 251 ProSiteProfiles FAS1/BIgH3 domain profile. 40 183 IPR000782 -
Vifa6g00628 251 MobiDBLite consensus disorder prediction 203 217 - -
Vifa6g00628 251 Gene3D FAS1 domain 16 186 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00628 Vifa-Chr6 239182206 239182961 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00628 - - psat:127107944 402.519