Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00622 ATGGCTAGAGGAAAGTTGAGTATCTGTGTAGCCTTCTTTGTTTTACTTATCGCCATGGAAGCTTCCATTGCTCAAGGCCAAGGAAACGGCAACGGTAACAACGGTAATGGTAATGGTAACGGTAACAACGGTAAGGATAATGGTAACGGTAACAATGGGAAGAATAATGGTAATGGAAAAGGTAACAACGGAAAGGAGAAGGAGAAAGATCCAAAAAGGAAGACACCGAAAGATGATGAATCTGCAAAGTCTGAAAAGTTGCCAGCTCTGAAATCGGGACAGGAGCGAGCTTTCTGCAAGGCGAAAAATAGTTGTCAATTCAAGACACTTGTATGTCCAGAAGAGTGCAAAGTCAGGAAGCCAAAGAAGAACAAGAAGGTTAAAGGTTGTTTCCTTGACTGCAGCAGCAAATGTGAAGCCACTTGCAAGGTTAGAAGAGCAAACTGTGATGGCTTTGGTTCATTGTGCTATGATCCTCGCTTTGTTGGTGGTGACGGTGTGATGTTCTACTTCCACGGAGCCACGGGAGGAAACTTTGCCATTGTTTCAGACGACGAATTCCAAATCAACGCGCACTTCATTGGTACTCGACCTCAGGGAAGGACACGCGACTACACATGGGTGCAAGCACTTTCTGTCATGTTCGACACTCACACTCTTGTTATTGCAGCCAATAGAGTAACTCAATGGAATGACAATATTGACTCTCTTACCGTGAAATGGGACGGCGAACTAGTAACTATTCCTATTGACAATGACGCGGAATGGAAGACTAATGGAGATGAAAGGGAAGTGGTTGTGGAGAGAACAGATGATAAAAACAATGTTAGAGTGACAGTTTCTGGTTTGCTTGAAATGGACATAAGGGTAAGGCCTATTGGAGAAAAAGAAAACAAAGCTCATAACTACCAATTGCCATCAGATGATGCTTTTGCTCATTTGGAGACACAGTTCAAGTTCAAAAATCCTACTGATTTTATTGAAGGAGTTTTGGGTCAAACTTATAGGCCAAGTTACGTTAGTCCTGTAAAGAGAGGTGTTTCTATGCCAATGATGGGAGGAGAAGACAAGTACCAAACTCCATCTCTCTTTTCAACATCCTGCAGATTCTGTAGGTTCGAGAGGCCTTCTACTAGCCAAGGGCTGATTGCTCAATATTGA 1161 0.4298 MARGKLSICVAFFVLLIAMEASIAQGQGNGNGNNGNGNGNGNNGKDNGNGNNGKNNGNGKGNNGKEKEKDPKRKTPKDDESAKSEKLPALKSGQERAFCKAKNSCQFKTLVCPEECKVRKPKKNKKVKGCFLDCSSKCEATCKVRRANCDGFGSLCYDPRFVGGDGVMFYFHGATGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALSVMFDTHTLVIAANRVTQWNDNIDSLTVKWDGELVTIPIDNDAEWKTNGDEREVVVERTDDKNNVRVTVSGLLEMDIRVRPIGEKENKAHNYQLPSDDAFAHLETQFKFKNPTDFIEGVLGQTYRPSYVSPVKRGVSMPMMGGEDKYQTPSLFSTSCRFCRFERPSTSQGLIAQY 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00622 386 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 6 378 - -
Vifa6g00622 386 MobiDBLite consensus disorder prediction 61 87 - -
Vifa6g00622 386 MobiDBLite consensus disorder prediction 30 60 - -
Vifa6g00622 386 MobiDBLite consensus disorder prediction 30 87 - -
Vifa6g00622 386 Pfam Root cap 317 373 IPR009646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00622 Vifa-Chr6 238161491 238162762 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00622 - - lja:Lj3g3v3086010.1 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00622 6 238161491 238162762 Vifa6g00622 6 238161491 238162762 ECH