Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00611 ATGCAAGATCAGGTCAAAACCATTTTGGCGAAACTTAAACCTCATTTTGTTTTCTTTGATTTCGTACAAAACTGGCTACCAAAAATAGCTTCTAAACTTGGCATCAAATCTGTTCGCTTCTCTGTCTATTCTGCAATTTCTACTTCTTATCTATCTCCACATTTAAGAATTTCTGAAAAAAGAGACATGACTTATGAGGACCTTAAAAATCCTCCATTTGGGTATCCTCAAAAATCCAAAACTTCCCTTCAAACCTTCCAAGCCAAAATGATCTTTCCGATGATGTTCCAGAGATTTGATGACAACCCAATTGTTTCTGATAGAGTCACGCAGATACTCAGTGAATGCTCACTAGTAGTGTTGAAAAGTTGCAGGGAAATAGAAGATAATTTTCCAACAAAGTCAGTCATATTGTGTTCCTTTGGCAGTGAAACATTTCTAAGTGATGATCAAATCAACCAACTAGCAATTGGGTTGGAACTCACAAGTTTACCTTTCATTTTGGTTTTGAATTTTACATCAAATTTGAATGCTGAGGTTGAGTTGGAAAGAGCATTACCAAAAGGCTTCATAGAGAGAGTGAAGAATAGAGGAATTGTGCATAGTGGTTGGTTGCAGCAGCAACTTGTTTTAAATCACTCAAGTGTAGGGTGTTATGTGTGTCATGCTGGTTTTAGTTATGTGATAGAAGCTATAGTTAATGATTGTCAGTTGGTGCTGTTACCTTTCAAGGGAGATCAGTTTTTGAATTCTAAGCTTGTTGCTGATGATTTGAAAGCAGGGATAGAGGTGAATAGGAATGATGAAGATGGGTTTATTGAGAAAGAGAAACTGTTGGAGGCTGTGAAAGCTGTTATGGTGGAGAACAAATTCATTGTAGATCCGGTTGAGCAGTTGAAGTCTTTGGCTTGGTGA 915 0.3727 MQDQVKTILAKLKPHFVFFDFVQNWLPKIASKLGIKSVRFSVYSAISTSYLSPHLRISEKRDMTYEDLKNPPFGYPQKSKTSLQTFQAKMIFPMMFQRFDDNPIVSDRVTQILSECSLVVLKSCREIEDNFPTKSVILCSFGSETFLSDDQINQLAIGLELTSLPFILVLNFTSNLNAEVELERALPKGFIERVKNRGIVHSGWLQQQLVLNHSSVGCYVCHAGFSYVIEAIVNDCQLVLLPFKGDQFLNSKLVADDLKAGIEVNRNDEDGFIEKEKLLEAVKAVMVENKFIVDPVEQLKSLAW 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00611 304 Gene3D Glycogen Phosphorylase B; 1 130 - -
Vifa6g00611 304 Gene3D Glycogen Phosphorylase B; 131 303 - -
Vifa6g00611 304 FunFam Glycosyltransferase 124 303 - -
Vifa6g00611 304 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 136 289 IPR002213 GO:0008194
Vifa6g00611 304 CDD GT1_Gtf-like 1 291 IPR002213 GO:0008194
Vifa6g00611 304 PANTHER GLYCOSYLTRANSFERASE 2 129 - -
Vifa6g00611 304 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00611 Vifa-Chr6 236721588 236722695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00611 2 286 Glycosyltransferase AT4G27570 35.061 6.09e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00611 K22772 - gmx:100819964 390.963