Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00562 ATGGCAAAGCTTGCTTCAATTGTTTTGATTTTCAGTTTAATAACAACACTTGTTTTGCTATCTTCATGCCCAGCAATGTCTCAAGAAGTTGAGGATGAGAGTGAGTTTAATTATGATGAAGGGAGTGATAAAGGACCACAAAACTGGGGGAACATTAAACCAGAATGGTTCATGTGCAAAAATGGAACAAAGCAATCACCAATTGATTTATTGAATCCAACGGTTCAAATTGTATCAAATTTAGGAGCACTCCAAATTAACTACAAGCCCTCTAATGCAACTCTTAAAAATAGAGGTCATGATATCATGTTGGAATTATCTTCCAACTCAAGCTATCTACAAATTAATGGAACTCAATATGTGCTTAAACAACTCCATTGGCATTCTCCTTCTGAACACACCATAGATGGCCAAAGATTTGATTTAGAGTTACATTTGGTGCATCAAACTCCTTCAGAAAAAATAGCAGTGATTGGAGTATTATACAGGATTGGAAACCCAGATTTTTTCTTGTCATTGTTGAAAGAGGACTTGGAGGCAATTTCTGAAAATAACGGGGCAGAAAGGGAAGTAGGTATGGTTGATCCTAACCTGATTGCACTTGGCAGAGGGCAGTATTATAGATACATTGGTTCGTTGACTACTCCACCATGCTCTGAAAATGTTACCTGGACAATTGTTACAGAGATCAAATGTGTTTCAACGGAGCAAATTCAATTGCTTCGAACTGCAGTTCATGATAAATCAAACTCGAATGCAAGACCATTGCAACCAGTAAATGGCCGGTTAGTGCAGCTGAATAAATATAGAGTATGA 816 0.3738 MAKLASIVLIFSLITTLVLLSSCPAMSQEVEDESEFNYDEGSDKGPQNWGNIKPEWFMCKNGTKQSPIDLLNPTVQIVSNLGALQINYKPSNATLKNRGHDIMLELSSNSSYLQINGTQYVLKQLHWHSPSEHTIDGQRFDLELHLVHQTPSEKIAVIGVLYRIGNPDFFLSLLKEDLEAISENNGAEREVGMVDPNLIALGRGQYYRYIGSLTTPPCSENVTWTIVTEIKCVSTEQIQLLRTAVHDKSNSNARPLQPVNGRLVQLNKYRV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00562 271 FunFam Alpha carbonic anhydrase 3 33 270 - -
Vifa6g00562 271 ProSitePatterns Alpha-carbonic anhydrases signature. 131 147 IPR018338 GO:0004089|GO:0008270
Vifa6g00562 271 ProSiteProfiles Alpha-carbonic anhydrases profile. 34 268 IPR001148 -
Vifa6g00562 271 Gene3D Alpha carbonic anhydrase 32 270 IPR036398 -
Vifa6g00562 271 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Vifa6g00562 271 PANTHER CARBONIC ANHYDRASE 33 262 IPR023561 GO:0004089|GO:0008270
Vifa6g00562 271 CDD alpha_CA_prokaryotic_like 45 266 IPR041891 -
Vifa6g00562 271 SMART Carb_anhydrase_2a 38 268 IPR001148 -
Vifa6g00562 271 Pfam Eukaryotic-type carbonic anhydrase 45 267 IPR001148 -
Vifa6g00562 271 SUPERFAMILY Carbonic anhydrase 35 264 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00562 Vifa-Chr6 220513059 220515337 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00562 K01674 - gmx:100811978 365.925