Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00553 ATGAAGGTTGAAATTCAAAATATGAAAAATAATAATCAGGTTCACGGTGGAATTGGTGAGGGTAGTAATAAAATACTGTATATAGTTGTTATTGACGATGCTGAGAAGAAACAGAAAGACAAAGGAAAAGAATCGTTTTGCTACACGCGTTCCGTTTTGCAGAGTACTCTGCAACTTATGGGATGCAAAGCGCGACACGCATTCAAGATTAGCAAAACAGTTTTTGAACGCACAAAGAGCGAGACTTCTACCGATATTTTGCAGCCTGATGCAGCAGTTTCATCAGGTCTTGACGCACCCAAGGGAAATTTTGTGAAGAAAGAAGGCTGCAATGCTGGTGTTTGCCTTGGTAAAGTAGACTTAGGAAGCAAATCATTTTTGGGGAAAGATAATAGAAGTAAGAGTATACCATTTGAGTTGTACAAAAGACGGACATCTGTGTTTGTTCGGAGAGAAACATTTCTAGATATTGCATGTGATGCTTTGGCCGAGTACAAATACGTGGGTCCTAACCATAGAGCAGACTTGGTTCTAGCCTGCAGACTCCGCGAGAGGAAGGAATCCGTGACAGTGCTGTTGTGTGGCACTAGTGGATGTGGCAAATCTACGCTGTCTGCATTACTGGGTAGCCGATTGGGAATCACAACAGTTGTATCAACTGATTCTATTAGGCACATGATGCGAAGCTTTGCTAATGAGAAGGAAAACCCTTTGTTGTGGGCTTCTACCTACCATGCAGGCGAATGTTTGGATCCTGTTGCTGTTGCAAAAGCAAGGGCCAAAAGGAAAGCAAAAAAGATGAAAGGTGTCTCGGAGTCACTTACCAAGGATGAAGTGATTGACAGTGACAATTCTGTCAAATCTGACTTACGAACGTCCGAGATGAGCTCTAGTGCAACCGAGCTTCCAAGTCCTAAAGAAATGGCTGTCGAAGGATATAAGGCGCAGAGTGAGATGGTGATAGACAGTCTTGATAGGCTAATCACTTCCTGGGAAGAACGAAAAGAGTCTGTTGTTGTCGAGGGTGTTCATCTGAGCCTCAACTTTGTCATGGGACTCATGAAAAAACACCCATCGATCATACCATTCATGGTATACATTACAAACGAGGAGAAACACTTGGAAAGATTTGCTGTGCGTGCGAAGTATATGACACTGGACCCAGCTAAAAACAAGTATGTGAAGTATATCCGAAACATCAGAACAATCCAGGATTATCTCTGTAAGCGTGCTGAAAAGCATTTAGTTCCCAAAATAAACAACACAAATGTTGACAAGAGTGTTGCAGCCATTCATGCAACTGTCTTCAGCTGTCTTCGAAGGCGTGAAGTTGGGGATCAACTATACGATCCTGTTAGGAATACCGTAACAGTTGTTGATGAGGAATACAGAAATCAATGTGCAGCCAACTCTTTGAGTTCAAAAGGAATGTTTCAATTGATTCAAAGAAAAGGTTCTTCAAGAGATCTGATGGCTTTAGTTAATACAGATGGGTCTGTCGCAAAGGCTTGGCCTGTTAATTCAGTCGATAGTAATGGGAAGCCCGTATGGGGTCCAGGACCAGAGAATGGAATGGGACATCCAATGTATGGTCCCTTACGAATTGGTAAGGCAGAGCCAGTAAATCTTCAGTTTGGTTTTTATGGAATCAGTGCTTGGCCTAGCGATGGTGGCACTAGTCATGCAGGGAGTATTGATGATTCAAAAGCTGATGGGACTGATACTGGAAGTAGATATCCATCCTCTACCTGTAGCTCACCTAGGATGTCAGATTGCCCGGCCAAGGAGCTTAAGGAACACTACTCGGTGCATGGTAGCGATGAAGAGAATGACGACCAGCCAGATGTGGGCAGTGATGAGGATTTCAGTGACGACGGTGACGGTGACAATAATGTTGATGAGGTTGGATCTGTTGATGAGGAATCAACAAAGTCTGATGAAGAATACGACGATCTTGCAATGCAAGATGTGTTGGAAAATGGTTATTGGTCCGATGATGATTATGAGTTTACGAGTAAACTTGCTTCTGCGGAGCTTGCAATTAAAATCCATGGAAATAAGTACAAGCAAAACATGGATCATTTTCTCAGAACTAGAAGTGAACCAGTGCCAATAGAAGTGGCATCTCAAGAGCCTCTATGCTCTTATTCTTCTCTACTTGCTGAAAAAAGTGAGAAGAAATTCTCATCAAATGGTAATGCCAAATTAAGAAAACGTTCTCTTAGTATTCCTGCAATAAGAAAACATAGTTCAGCTATCAATGATCCAATTCTCTCAGGTGCTCCTCAAAGGTTGTAG 2298 0.4238 MKVEIQNMKNNNQVHGGIGEGSNKILYIVVIDDAEKKQKDKGKESFCYTRSVLQSTLQLMGCKARHAFKISKTVFERTKSETSTDILQPDAAVSSGLDAPKGNFVKKEGCNAGVCLGKVDLGSKSFLGKDNRSKSIPFELYKRRTSVFVRRETFLDIACDALAEYKYVGPNHRADLVLACRLRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVVSTDSIRHMMRSFANEKENPLLWASTYHAGECLDPVAVAKARAKRKAKKMKGVSESLTKDEVIDSDNSVKSDLRTSEMSSSATELPSPKEMAVEGYKAQSEMVIDSLDRLITSWEERKESVVVEGVHLSLNFVMGLMKKHPSIIPFMVYITNEEKHLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCKRAEKHLVPKINNTNVDKSVAAIHATVFSCLRRREVGDQLYDPVRNTVTVVDEEYRNQCAANSLSSKGMFQLIQRKGSSRDLMALVNTDGSVAKAWPVNSVDSNGKPVWGPGPENGMGHPMYGPLRIGKAEPVNLQFGFYGISAWPSDGGTSHAGSIDDSKADGTDTGSRYPSSTCSSPRMSDCPAKELKEHYSVHGSDEENDDQPDVGSDEDFSDDGDGDNNVDEVGSVDEESTKSDEEYDDLAMQDVLENGYWSDDDYEFTSKLASAELAIKIHGNKYKQNMDHFLRTRSEPVPIEVASQEPLCSYSSLLAEKSEKKFSSNGNAKLRKRSLSIPAIRKHSSAINDPILSGAPQRL 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00553 765 MobiDBLite consensus disorder prediction 283 307 - -
Vifa6g00553 765 MobiDBLite consensus disorder prediction 574 589 - -
Vifa6g00553 765 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 441 IPR027417 -
Vifa6g00553 765 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 23 664 - -
Vifa6g00553 765 MobiDBLite consensus disorder prediction 592 611 - -
Vifa6g00553 765 MobiDBLite consensus disorder prediction 557 650 - -
Vifa6g00553 765 MobiDBLite consensus disorder prediction 612 647 - -
Vifa6g00553 765 Gene3D - 185 443 IPR027417 -
Vifa6g00553 765 MobiDBLite consensus disorder prediction 289 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00553 Vifa-Chr6 217075647 217080032 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00553 - - tpra:123919917 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00553 6 217075647 217080032 Vifa6g00553 6 217075647 217080032 ECH