Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00455 ATGGAAAATCTGCTTCATTTCCGCGTCATTCTTCTCTTTCTCTCTTCCCTTTTTCTTCTTCAAATTCGAAACGTAACGTCTTTCAGAAACGAAGATGATTCAGAAGCATGGGGTTACGTTCAAGTCAGACCTAAAGCGCATATGTTTTGGTGGCATTATAAGAGTCCTTACAGAGTAGAAGATCCTTCTAAACCATGGCCAATTATTCTGTGGTTGCAGGGTGGTCCTGGTGCTTCTGGTGTTGGAATTGGAAACTTTGAAGAGGTTGGACCTTTGGATACTAACTTGAAACAAAGGAATTCAACATGGTTGTTGAAAGCAGATCTCTTGTTTGTGGACAATCCAGTTGGGACAGGGTACAGTTTTGTGGAGGATGAAAAACTTTTTGTGAAAACCGATGAGGAAGCGGCCACAGATTTGACAACTTTGTTAATTAAGTTATTCAATAATGATGAAAAACTCCAAAAGAGTCCTCTCTACATTGTGGCAGAATCCTATGGTGGTAAATTTGCTGTCACTCTTGGATTATCTGCTCTTAAAGCTATTGAAGACAAGAGATTGAAACTTACACTTGGAGGTGTGGCATTAGGAGACAGTTGGATCTCACCAGAAGATTTTGTGTTATCATGGGGTCCTCTCCTCAAAGACCTCTCAAGACTCGATGAGAATGGACTGGAAAAGTCAGACAGTTTAGCTCAGAAGATCAAGAAGCAACTTGAAGATGGTAAATTTGTTGAAGCAACTGATACATGGGGTGACCTTGAGTCAGAGATTTCTGCTAGCAGCAACAATGTGGATTTTTACAATCTCTTGTTGGATGAGGGAAGTGATTCAGCAACCATATCAGCATTGAAACTGGGATTATTCAAAGAAACATCAATGAAGCGGTACTCCAAGTATCTTACTTCCAAAAGGACAAGATCTTATTCTCCTGGTGGTGATAATGATCTTGGCACTTTACTAAACGGTGTTATAAAGAATAAGTTAAAGATCATCCCTGAGAATGTCACATGGGGAGGGCAGTCCGATAAAGTTTTCACCTATCTTGGAGGTGATTTTATGAAGCCAAGAATTGATGAGGTTGATCAGCTACTGGCTAAGGGAGTCAATGTGATTGTGTACAATGGACAGGTTGATCTGATTTGTGCTACCAAAGGGACTGAAGCTTGGGTTAGGAAACTCAAGTGGGAAGGGCTAAAAAATTTCTTAGGGAAAGACAGAACAGCCCTCTACTGTGGAAATAACAAAACAACCAAAGGCTTTTTCAGGTCATACAAAAACCTACAATTCTATTGGATTCTTGGAGCTGGCCATTTTGTACCTACTGATCAGCCTTGTGTTGCATTAGGAATGATAGCTTCAATTACACAGTCACCAGCTGCTTGA 1386 0.4048 MENLLHFRVILLFLSSLFLLQIRNVTSFRNEDDSEAWGYVQVRPKAHMFWWHYKSPYRVEDPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTNLKQRNSTWLLKADLLFVDNPVGTGYSFVEDEKLFVKTDEEAATDLTTLLIKLFNNDEKLQKSPLYIVAESYGGKFAVTLGLSALKAIEDKRLKLTLGGVALGDSWISPEDFVLSWGPLLKDLSRLDENGLEKSDSLAQKIKKQLEDGKFVEATDTWGDLESEISASSNNVDFYNLLLDEGSDSATISALKLGLFKETSMKRYSKYLTSKRTRSYSPGGDNDLGTLLNGVIKNKLKIIPENVTWGGQSDKVFTYLGGDFMKPRIDEVDQLLAKGVNVIVYNGQVDLICATKGTEAWVRKLKWEGLKNFLGKDRTALYCGNNKTTKGFFRSYKNLQFYWILGAGHFVPTDQPCVALGMIASITQSPAA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00455 461 SUPERFAMILY alpha/beta-Hydrolases 28 458 IPR029058 -
Vifa6g00455 461 ProSitePatterns Serine carboxypeptidases, serine active site. 161 168 IPR018202 GO:0004185
Vifa6g00455 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 122 IPR001563 GO:0004185|GO:0006508
Vifa6g00455 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Vifa6g00455 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 172 IPR001563 GO:0004185|GO:0006508
Vifa6g00455 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 445 IPR001563 GO:0004185|GO:0006508
Vifa6g00455 461 Gene3D alpha/beta hydrolase 18 460 IPR029058 -
Vifa6g00455 461 FunFam Carboxypeptidase 20 460 - -
Vifa6g00455 461 Pfam Serine carboxypeptidase 34 456 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00455 Vifa-Chr6 178371335 178374841 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00455 K09646 - gmx:100808412 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00455 6 178371335 178374841 Vifa6g00455 6 178371335 178374841 ECH