Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00442 ATGGAAAAAAAGATGCAAAGTAAAGTGAAGGAGTGGAAGGGTTACATTGATTACTGTTGTTGGTTGATTGGGTATGTGTGTACAATTTGGTGGCTTTTTTCTTTTTTGTATCAGTTTTTGCCAGCTACATTGATTGGATTTGAAGTGGTTGAGTCACCTGGGTTGAGGTTAAATCGTGAAGGGGTTAAAGGTGTTCATCCTGTTGTTTTGGTTCCTGGGATTGTGACTGCTGGTTTGGAGCTTTGGGAAGGCAGGCCTTGTGCTGATGGACTTTTCAGAAAGCCTTTGTGGGGTGCTACTTTGCCTCAAATCCTCAAAAGGCCTTTATGCTGGTTAGAGCATCTCTCTCTGCACAATGAGACTGGTCTAGACCCTCCAGGAATTCGAGTCAGGGCAGTACCGGGGCTTGTTGCTGCCGACGATTTTGCTTCTGGCTATCATGTTTGGGCAGTGTTAATTGAAAATTTAGCAAGAATAGGTTATGAAGGGAAGAACTTGCACATGGTTACATATGACTGGAGACTGTCTTTCCAAAACACTGAGATTCGAGACCAAGCTCTTAGTAGATTGAAAAGTAAAATTGAGCTTATGTTTGTAACAAATGGCTATAAGAAAGTGGTAGTTGTGCCTCAATCTATGGGGGCTATTTATTTTCTCCATTTCCTAAAATGGGTTGAGACACCACCTCCCATGGGTGGTGGTGGTGGTCCAGGTTGGTGCGAAAAGCATATCAAAGCAATCATGAATATTAACCCGGCATTTCTCGGTGTTCCGAAGGCAGTAAGCAATATATTTTCAGCTGAAGGCAGTGATGCTGCATTTGTCAGAGCCGTGACTTCCGGCATTTTAAATTTCGATTACCTTGGTCTTCAAACGGTTGAACATGTCTTGCGGGCATGCAGAACTTGGGATTCAATCATCTCGTTGATGCCAAAAGGCGGTAAAACCATTTGGGGTGACTTGGATTGGTGTCCTAAAGAATGTAATAAATCTGAAAAGAGGGAACATATGAAGAAGCACTCTGTATATAACGGTACTTATAAATGCGGTGATATGCCAAAAGGTCTTCACGTAAAAGAACATATGAAGTATGGAGGAATAAACTCTTTTGGCAAGGCCGTTTCACAGTTACTTGCTTCACTTCTCACTACTCTTGATTCACAATTAGAGGAGATTTCGTCTGAACATAGTACTTTTAACTTATCATGTGAGGATGATCAGACTGAATGTAACGAGATACACCGAGAAAGCATCCCAAAAGTTGCTAAAAGAAAGGCTAGTAAAGGAAGAACTGATCTTGATTTATACAACTTTATGGCTCCAAAAATGATGAAGCGCGCCGAGGTTCATTTCTCTCACGGGATAGCAGAGAACTTAGATGATAAAAAATACACACATTACAAATACTGGTCTAATCCACTTGAAACCAAGCTACCTGATGCTCCGAATATGGAAATATATTGTCTATACGGTGTTGAAATTCCAACAGAAAGATCATACGTGCACAAGCCGTCCCCTCCCGACAAGCACAATCCTTTCCCGAATAATAGTTCAGCTGACGAAGGTAATGGAAGTAAATTACAAAATGATGTTTTAGTGAGTGATGACGAGCGTGTGAACGCTCTTAGTTCAGGGTTCATGTGTGCCAAAGTATGGCGCAGAAAAACACGATTCAATCCTTCTGGCATGGCTACATATGTACGAGAGTATCAGCAAAAACAAAGAAGTAGTGTTCTTGAGGGGAGAGGTCTAGAGGGCAGATCACGCGTCAACAACATTATAGGAAACGTTGCGTTGATTGAAGATGTTTTGCAAGTTGCTGCTGGAGCCACCGGTGCAAATATTGGAGGTGATAGGATATTTTCAGATATCACGAGGATATCGGAGAAGATAAATCTCAGATTATGA 1908 0.4167 MEKKMQSKVKEWKGYIDYCCWLIGYVCTIWWLFSFLYQFLPATLIGFEVVESPGLRLNREGVKGVHPVVLVPGIVTAGLELWEGRPCADGLFRKPLWGATLPQILKRPLCWLEHLSLHNETGLDPPGIRVRAVPGLVAADDFASGYHVWAVLIENLARIGYEGKNLHMVTYDWRLSFQNTEIRDQALSRLKSKIELMFVTNGYKKVVVVPQSMGAIYFLHFLKWVETPPPMGGGGGPGWCEKHIKAIMNINPAFLGVPKAVSNIFSAEGSDAAFVRAVTSGILNFDYLGLQTVEHVLRACRTWDSIISLMPKGGKTIWGDLDWCPKECNKSEKREHMKKHSVYNGTYKCGDMPKGLHVKEHMKYGGINSFGKAVSQLLASLLTTLDSQLEEISSEHSTFNLSCEDDQTECNEIHRESIPKVAKRKASKGRTDLDLYNFMAPKMMKRAEVHFSHGIAENLDDKKYTHYKYWSNPLETKLPDAPNMEIYCLYGVEIPTERSYVHKPSPPDKHNPFPNNSSADEGNGSKLQNDVLVSDDERVNALSSGFMCAKVWRRKTRFNPSGMATYVREYQQKQRSSVLEGRGLEGRSRVNNIIGNVALIEDVLQVAAGATGANIGGDRIFSDITRISEKINLRL 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00442 635 Gene3D alpha/beta hydrolase 119 298 IPR029058 -
Vifa6g00442 635 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 6 628 - -
Vifa6g00442 635 MobiDBLite consensus disorder prediction 499 527 - -
Vifa6g00442 635 Pfam Lecithin:cholesterol acyltransferase 92 363 IPR003386 GO:0006629|GO:0008374
Vifa6g00442 635 Pfam Lecithin:cholesterol acyltransferase 437 577 IPR003386 GO:0006629|GO:0008374
Vifa6g00442 635 MobiDBLite consensus disorder prediction 512 527 - -
Vifa6g00442 635 SUPERFAMILY alpha/beta-Hydrolases 60 267 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00442 Vifa-Chr6 174423428 174427168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00442 16 635 Acyl Lipid Metabolism Gene Families AT3G44830 60.794 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00442 K00679 - cave:132163820 843.188