Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00435 ATGGGTACTCTTCTTCCAAGCTCAATAGAAGAGCATGAAAAATCAGAGAAGCAAAATATATCTATACAAATTCAACAAAAAGATGTTGATGCAGGTGCTCTCTTTGTCCTCAAATCAAAAGGTTCATGGGTACATTGTGGTTACCACTTAACAACATCAATTGTGGCAGCACCACTTCTGAGTCTTCCTTATGCTTTCACATTCCTTGGATGGACTGCTGGAATATTTTTCTTACTTCGATTTCGAGACATGGCTCGCGATATTTTAGGTCCTAAGTGGGGTCGTTATTTTGTGGGACCGATTCAATTTGCATTATGCTATGGGGTCGTAGTTGCTTGTATTCTTCTTGGCGGTCAATGCATGAAGGCAATTTATGTCTTATCAAATCCACATGGGTCAATGAAGCTTTACGAGTTTGTCATAATATTTGGTTGCTTCATGTTGATTTTGGCTCAAATCCCATCTTTTCACTCATTGAGACACATTAATCTTGTCTCTTTAGTTCTCTGCTTACTCTATAGTGCTTGTGCTGCTGCTGGTTCTATATATATTGGAAATTCATCAAAAGGACCAGAAAAGAACTATACTTTGAAAGGTGATACAGAAAATCGAGTATTCGGAATCTTCAATGCTCTCAGCATCATTGCCACTACCTATGGAAATGGAATCATTCCTGAAATTCAGGCTACGTTAGCTCCACCAGTTAAAGGAAAGATGTTCAAGGGATTAAGTGTTTGTTATACTATAGTAATTGTCACTTTCTTTACCGTTACTATATCTGGTTATTGGGCGTTTGGCAATGAATCTCAAGGTCTTATCTTAAGCAACTTTGTGGATAATGGGAAACCATTATTGCCCAAATGGTTTGTTTACATGAGCAATGTTTTTACTATAGCACAATTATCTGCGGTTGGTGCGGTGTACTTACAACCTACAAATGAAGTATTAGAGCAAATATTTGGAGATCCAAAAAGTCCAGAGTTCTCGACCCGCAATGTTATCCCTAGAGTGATTTCTCGATCATTGGCAATTACTATAGCAACCGTTATAGCAGCCATGCTTCCATTTTTTGGGGACATAAACTCACTTATTGGAGCTTTTGGATTTATGCCACTTGACTTTGTTTTACCTGTAATTTTCTATAATTTGACATTTAAGCCATCTAAGAGAAGTCCTATTTTTTGGTTGAATGTATCAATTGCTGTTGTTTTTTCTACATTGGGAGCTATAGCAGCAATTGCAGCTGTTAGACAGATAGTCCTTGATGCCAAAAATTATAAACTATTTGCTAATGTATGA 1299 0.3726 MGTLLPSSIEEHEKSEKQNISIQIQQKDVDAGALFVLKSKGSWVHCGYHLTTSIVAAPLLSLPYAFTFLGWTAGIFFLLRFRDMARDILGPKWGRYFVGPIQFALCYGVVVACILLGGQCMKAIYVLSNPHGSMKLYEFVIIFGCFMLILAQIPSFHSLRHINLVSLVLCLLYSACAAAGSIYIGNSSKGPEKNYTLKGDTENRVFGIFNALSIIATTYGNGIIPEIQATLAPPVKGKMFKGLSVCYTIVIVTFFTVTISGYWAFGNESQGLILSNFVDNGKPLLPKWFVYMSNVFTIAQLSAVGAVYLQPTNEVLEQIFGDPKSPEFSTRNVIPRVISRSLAITIATVIAAMLPFFGDINSLIGAFGFMPLDFVLPVIFYNLTFKPSKRSPIFWLNVSIAVVFSTLGAIAAIAAVRQIVLDAKNYKLFANV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00435 432 PANTHER OS05G0424000 PROTEIN-RELATED 30 411 - -
Vifa6g00435 432 Pfam Transmembrane amino acid transporter protein 80 416 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00435 Vifa-Chr6 172197970 172200969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00435 104 432 Organic Solute Cotransporters AT1G08230 66.163 2.59e-155 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00435 - - gmx:100791114 704.131