Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00379 ATGGCGAAGGTGAACCTCGACGGCAAACCAATCACTCCGGTGTCAATATGCATGATCGGCGGCGGAGGATTCATCGGATCACACCTATGCGAAAAGCTAATGTCCGAAACTTCTCACACAGCCATAGTCATCGATGTTTCCTCCGAGAAAATCAATTATCTTCTCGATAAGTCTCTTCCCTGGGCCAAACGTATCGAGTTTCATCACATGAACATCAAGAACGATTCACGCCTTGAGACTCTCGTCAAAGCCTCCGATCTCACTATCAATCTTGCTGCGATTTGCACGCCGGCGGATTATAATACGCGGCCGTTGGATACTATTTTCAGTAATTTCATTGATGCCATTCCGGTGATTAAATTTTGCACTGAGAATAACAAGCGTTTGATTCATTTTTCTACTTGTGAGGTCTTTGGGAAGACTATAGGTAGCTTTCTGCCTGAGGAATATAGAAAGGACCCCCAATATTACATGCTCAAAGAAGATGTGAGTCCTTGTATTTTTGGTCCAGTTCAGAAACAAAGATGGTCTTATGCATGTGCAAAGCAAATGACAGACAGGTTAATTTATGCTGAGCATGCTGAGAATGGCCTGAAGTTCACTATTGTGAGACCTTATAACTGGATTGGACCAAGAATGGACTTCATTCCTGGTGTGGATGGCCCGAGTGACGGTGTCCCCAGAGTTTTAGCTTGTTTCAGTAATAATCTCCTTCGTGGTGAGCCGCTCAAGCTTGTTGATGGCGGACGTTCCCAGAGAACCTTTCTCTATGTCAAAGATGCAATTGAGGCTGTTTTGTTAATGATTGATAACCCTGATAGAGCAAATGGACACATCTTTAATGTGGGAAACCCGGACAATGAAGTATCTGTGAAGCAACTAGCTGAGCTTATGATAGAGGTATATGCAAAGGTGGCTGATGTACCTGCCTCTAGTCTATCAACTCTGGATGTGACTTCAGAGGATTTCTATGGAAAAGGCTATGATGACAGTGATAGGCGCATCCCTGACATGACAATTATCACTAAGCAGCTTGGTTGGAAGCCAAGGACATCACTTGATGAACTGTTGGATTCTACCCTTCAATATCAACATCAGACATATTCTCATGCTATCAAGAAAGAACTCTCAAAGCCTTCAACTTGA 1146 0.4346 MAKVNLDGKPITPVSICMIGGGGFIGSHLCEKLMSETSHTAIVIDVSSEKINYLLDKSLPWAKRIEFHHMNIKNDSRLETLVKASDLTINLAAICTPADYNTRPLDTIFSNFIDAIPVIKFCTENNKRLIHFSTCEVFGKTIGSFLPEEYRKDPQYYMLKEDVSPCIFGPVQKQRWSYACAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGRSQRTFLYVKDAIEAVLLMIDNPDRANGHIFNVGNPDNEVSVKQLAELMIEVYAKVADVPASSLSTLDVTSEDFYGKGYDDSDRRIPDMTIITKQLGWKPRTSLDELLDSTLQYQHQTYSHAIKKELSKPST 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00379 381 Gene3D - 14 374 - -
Vifa6g00379 381 Pfam NAD dependent epimerase/dehydratase family 16 283 IPR001509 -
Vifa6g00379 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 366 IPR036291 -
Vifa6g00379 381 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 16 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00379 Vifa-Chr6 153874474 153877075 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00379 K12449 - gmx:100790039 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00379 6 153874474 153877075 Vifa6g00379 6 153874474 153877075 ECH