Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00358 ATGAACAAAAATGAACAGCGCGTTGTTATCTTGGGAGGAGGCATCGCCGGCTCCGTCGTCGCTAAATCTCTTCAATCCCATTCACATGTCACCCTCGTTGATCCGAAGGAATATTTTGAGATTTCATGGGCGAGTTTGAGGGCAATGGTGGAGCCATCTTTTGCAGAAAGGACATTGATAAACCATAGAGAGTATTTCACAAAAGGTGACCTTGTTACATCCAGTGCTGTCAATGTGACGGAAACCGAAGTGTTGACCGCAGACGGTGGTCGGGTTCCGTACGACTATCTTGTTATTGCCACTGGTCATGCGGATCCTGTACCGAAAGTTAGGGCCGAAAGACTTCATCAGTATGAAGAAGAAAATCAAAAGATAAAATCTGCTCGTTCCGTTCTGATTGTTGGAGGAGGTCCAACCGGTGTGGAACTTGCTGGAGAGATAGCGGTTGATTTTCCAGACAAGAAGGTTACACTAGTGCACAAAGGACCAAGACTGCTGGAATTCGTAGGGGCAAAAGCTGCTGATAAGACTCTAAAATGGTTGAAATCTAAGAATGTTGACGTGAAACTAGACCAAGCAGTCGACTTAAACAGTGCCGCAGACGGACACAAGATATATCGAACTTCAGTTGGGGGAACTATTGAAGCAGATTGTCATTTCTTATGCACGGGAAAACCACTTGCTTCGGCATGGCTTAAAGAAACTGTGTTGAAAAATGACTTGGATGTTCAGGGAAGGATTAAGGTAGACGAACATTTGAGAGTTAAGGGGCGGAGCAACGTTTTCGCAATTGGAGATATTACAGATATTCCGGAAATCAAGCAAGGGTTTTTAGCACAGAAGCAGGCGGAAGTGGTTGCGAAGAACGTGCGGGTGATGATAGAGGGAGGAAGTGATTGTCGGAGGGAAAGTTACAAACCACATTCAGTATTGGCAATAGTTTCACTTGGGAGGCATGATGCAGTTGCACAGTTCCCATTCATAACAATCAGTGGAAGAATTCCTGGCATAATAAAATCTGGAGATTTATTTGTTGGTAAAACAAGAAAACTAATGGGTCTCAGTCCTCATATTGTATAA 1080 0.4407 MNKNEQRVVILGGGIAGSVVAKSLQSHSHVTLVDPKEYFEISWASLRAMVEPSFAERTLINHREYFTKGDLVTSSAVNVTETEVLTADGGRVPYDYLVIATGHADPVPKVRAERLHQYEEENQKIKSARSVLIVGGGPTGVELAGEIAVDFPDKKVTLVHKGPRLLEFVGAKAADKTLKWLKSKNVDVKLDQAVDLNSAADGHKIYRTSVGGTIEADCHFLCTGKPLASAWLKETVLKNDLDVQGRIKVDEHLRVKGRSNVFAIGDITDIPEIKQGFLAQKQAEVVAKNVRVMIEGGSDCRRESYKPHSVLAIVSLGRHDAVAQFPFITISGRIPGIIKSGDLFVGKTRKLMGLSPHIV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00358 359 Gene3D - 3 349 - -
Vifa6g00358 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 246 268 - -
Vifa6g00358 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 130 148 - -
Vifa6g00358 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 8 27 - -
Vifa6g00358 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 94 112 - -
Vifa6g00358 359 Pfam Pyridine nucleotide-disulphide oxidoreductase 7 272 IPR023753 GO:0016491
Vifa6g00358 359 FunFam apoptosis-inducing factor 2 4 352 - -
Vifa6g00358 359 SUPERFAMILY FAD/NAD(P)-binding domain 2 289 IPR036188 -
Vifa6g00358 359 PANTHER APOPTOSIS-INDUCING FACTOR 1 3 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00358 Vifa-Chr6 147854671 147856674 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00358 K22745 - gmx:100813439 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00358 6 147854671 147856674 Vifa6g00358 6 147854671 147856674 ECH