Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa6g00244 | ATGAAGGTTGTTGTAGAGAATCTAACAGGAACATTATTCTATGTCGAAGTAGAGAATGATGCCACGGTTGAAGATCTAAAAAGAGAAATTGAAGCACAAATGAAACTCCCTTGTGACCGTTTGATCATTATTCTTGATGATATTTGTTGGCCGTTGATTACGAAAGATGATGAAAAGGAATCTCTTGTTAATTGTGGAATCCAAGATGGGTCACATGTTTATATTTTCTTTATTCCTGTTGATGATGAATCTACCCAACATTTTGTGTTTACTCTGCCTGATTTCCTTGTTGGTTAA | 297 | 0.3502 | MKVVVENLTGTLFYVEVENDATVEDLKREIEAQMKLPCDRLIIILDDICWPLITKDDEKESLVNCGIQDGSHVYIFFIPVDDESTQHFVFTLPDFLVG | 98 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa6g00244 | 98 | SUPERFAMILY | Ubiquitin-like | 1 | 77 | IPR029071 | - | |
| Vifa6g00244 | 98 | ProSiteProfiles | Ubiquitin domain profile. | 1 | 75 | IPR000626 | GO:0005515 | |
| Vifa6g00244 | 98 | Gene3D | - | 1 | 77 | - | - | |
| Vifa6g00244 | 98 | Pfam | Ubiquitin-like domain | 1 | 39 | IPR040610 | - | |
| Vifa6g00244 | 98 | CDD | Ubl_ubiquitin_like | 3 | 76 | - | - | |
| Vifa6g00244 | 98 | PANTHER | UV EXCISION REPAIR PROTEIN RAD23 | 1 | 84 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa6g00244 | - | - | lja:Lj3g3v2900800.1 | 147.517 |