Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00160 ATGAGGAAAAATGTTGGTTCTCATTCAGGAAGGATGTTTAGTGACAAGAAATGGATTATCCCATTTTTCGCAAGTTTGTTGGTATCTGCCAGCATGGTTCTGACGGCTATTCTAGGTGAATTTAGTTCTTCTGGCAGGGAAGAGCTGTTGCCGCTGGTTGATGTGATTTCACTCAACGGACTAGAGGATAATTCCAGTGGATATTTTGTGGAGTCGGATTTGGAGAGGTCTTTTAATGGTAGTGTTGTTGTGAAGATGAAGGTGCCTAAGTTTGCATACCTTATTTCGGGCACAAAGGGTGATAGTCATAGGATGCTGAGGACATTAGAGGCAGTGTACCACCCCAGAAATCAGTACATTTTGCATTTAGATCTTGAGGCGCCGCCCCGGGAAAGGTTGGAGTTGGCAAATGCAGTGAAAGCTGATCCAATATTCAGGGAAGTGGAGAATGTGCGTGTTATGTCTCAATCTAATTTGGTTACTTACAAGGGTCCTACAATGATTGCTTGTACTCTTCAAGCTATTGCGATACTATTGAAGGAGAGTTCGGAGTGGGACTGGTTTATAAACCTCAGTGCCTCAGATTATCCTCTTGTGACACAGGATGATATGCTTCATGTTTTCTCTAATCTGTCAAGAGATCTCAATTTCATTGAACATACACGCATTACCGGTTGGAAATTGAACCAAAGAGCAAGGCCCATCATTATTGATCCCGCCTTTTACTTATCAAAGAAATCTGATTTGGCAGTGACTTCTCAGAAAAGAACACTTCCCACTTCTTTTAAATTGTTCACAGGTTCAGCTTGGGTTGTACTAACACGGTCTTTTGTGGAGTATTGTATATGGGGATGGGATAACTTTCCGCGGACGATGCTTATGTATTATACAAATTTTGTCTCCTCGCCAGAGGGATATTTTCATACTGTTATTTGTAACACTGAGAAGTTTCGGCACACTGCAATAAGTCATGATCTTCACTACATTGCTTGGGACAGTCCTCCAAAGCAGCATCCAATATCTTTATCTATGAAGGACTATGATAAAATGGCTAAGAGCAATGCTCCCTTTGCCCGGAAGTTTGGAAAAGATGATACAGCCCTAGACAAGATCGACAAAGAGCTTTTGGGGCGCACACATAGATTTTCTCCAGGAGCGTGGTGTATTGGGACATCAGATGGTGGAGCAGATCCGTGTTCTTTGCGGGGAAATGATACAGTGTTAAGGCCAGGACCTGGTGCGGAGAAGCTACACCAGTTGCTTCAGGTGCTGTTATCTGAAGAATTTATAAGTAAACAGTGTTTGTGA 1308 0.4258 MRKNVGSHSGRMFSDKKWIIPFFASLLVSASMVLTAILGEFSSSGREELLPLVDVISLNGLEDNSSGYFVESDLERSFNGSVVVKMKVPKFAYLISGTKGDSHRMLRTLEAVYHPRNQYILHLDLEAPPRERLELANAVKADPIFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLVTQDDMLHVFSNLSRDLNFIEHTRITGWKLNQRARPIIIDPAFYLSKKSDLAVTSQKRTLPTSFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFVSSPEGYFHTVICNTEKFRHTAISHDLHYIAWDSPPKQHPISLSMKDYDKMAKSNAPFARKFGKDDTALDKIDKELLGRTHRFSPGAWCIGTSDGGADPCSLRGNDTVLRPGPGAEKLHQLLQVLLSEEFISKQCL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00160 435 PANTHER GLYCOSYLTRANSFERASE 15 434 IPR044610 GO:0015020
Vifa6g00160 435 Pfam Core-2/I-Branching enzyme 91 350 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00160 Vifa-Chr6 70072733 70076040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00160 78 434 Glycosyltransferase AT1G03520 75.630 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00160 - - gmx:100795146 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00160 6 70072733 70076040 Vifa6g00160 6 70072733 70076040 ECH