Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00158 ATGAGCCGCTACGATCCAAACCCTTTCGAAGAAGAAGAGACTCATGTCAATCCCTTTGCGGATGGGACAGCTAAAAAAGGATCTGGGCAATCAAGTTATGGTGGAGGAGCATTTTACACTACTAACCCTGGAAGTGTTCCTTCTGCGACCTCAAGGCTCTCACCCCTTCCTCCTGAGCCTTATGATCGTGGGGCAACTGTTGACATCCCTCTTGATAGCTCAAAGGATGTCAAAGCAAAGGAGAAGGAACTTCAAGCTAAAGAGTCTGAATTGAAAAGAAGGGAACAGGAACTAAAACGAAGAGAGGACGCCATATCTCGAGCTGGTATTGTAATAGAGGAAAAAAATTGGCCACCTTTTTTTCCCATCATTCATCATGACATTGGAAATGAAATACCAATACATCTTCAAAGGATGCAGTATGTTGCATTTACAACGTGGTTAGGTTTGGTTCTGTGTCTTTTGTGGAATATAGTGGCAGTTACCACTGCTTGGATCAAAGGAGAAGGTCCAACCATCTGGTTTCTTGCTATTATATATTTTATTTCTGGTGCTCCAGGATCCTATGTAATGTGGTATCGCCCCCTTTATCGCGCTATGAGGACAGACAGTGCTCTAAAGTTTGGCTGGTTTTTTGTCTCGTACATGTTGCACATTGGCTTTTGCATTTTTGCTGCAGTTGCTCCACCCATTATCTTTAAAGGAAAATCTCTCACAGGTATTTTGGCTGCAATTGATGTGATAGGTGGCAGTGCATTGGTTGGGGTATTCTACTTTATTGGGTTCGCATTTTTCTGTCTTGAATCACTGATGAGCATCTGGGTTTTTCAGCAAGTATTGATGTACTTCCGTGGAAGTGGTAAGGCTGCAGAGCTGAAGCGAGAGGCAGCCAGAGGAACGATGATGGCAGCTCTATGA 918 0.4368 MSRYDPNPFEEEETHVNPFADGTAKKGSGQSSYGGGAFYTTNPGSVPSATSRLSPLPPEPYDRGATVDIPLDSSKDVKAKEKELQAKESELKRREQELKRREDAISRAGIVIEEKNWPPFFPIIHHDIGNEIPIHLQRMQYVAFTTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGAPGSYVMWYRPLYRAMRTDSALKFGWFFVSYMLHIGFCIFAAVAPPIIFKGKSLTGILAAIDVIGGSALVGVFYFIGFAFFCLESLMSIWVFQQVLMYFRGSGKAAELKREAARGTMMAAL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00158 305 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 302 IPR007273 GO:0015031|GO:0016020
Vifa6g00158 305 Pfam SCAMP family 114 285 IPR007273 GO:0015031|GO:0016020
Vifa6g00158 305 Coils Coil 74 104 - -
Vifa6g00158 305 MobiDBLite consensus disorder prediction 1 19 - -
Vifa6g00158 305 MobiDBLite consensus disorder prediction 24 52 - -
Vifa6g00158 305 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00158 Vifa-Chr6 68210296 68220876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00158 2 281 Miscellaneous Gene Families AT1G61250 69.366 6.96e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00158 K19995 - gmx:100796729 549.28