Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00143 ATGGTAGCGGAGGCAGACGTTTCCGGCAAAGAAGCCGCCGCCTTGATATTCACCTACGGAACGTTAAAAAGAAACTTCTCGAACCACCCTCTTCTCCAAGACCTAATCCTGAACGGCGACGCCTCTTTCATCGGAACCTACCGCACCGTCCAAAATTACCCTCTTGTATGTGGCCCCTACCGTGTCCCCTTCCTTCTCAACATTCCTGGGTCGGGTCAATCTGTGCACGGAGAACTGTACTCCGTCTCCACGGACGGGCTTTCGAGAATGGACGAACTGGAAGGAACCTCACGCGGTCACTACGAGCGTCTCCCTATCAAGGTGGTTCCTTCCGGTGAGGAGATGGAGGCAAAGATAACATGCGCCGAGGCATATTATGCGCACGGGAGCTACGCGATGGAGATGTGGAAGAAGAATGGAAAACAAGGGTTGAAGTGTTACACGGAGAATGAAACAATTGGGTATGTTAAGCGTAAAGATAGACCTCAACATTTGACTTTCCTTGATCATATTCGATTGTTCCTTTCCGATTGA 534 0.5037 MVAEADVSGKEAAALIFTYGTLKRNFSNHPLLQDLILNGDASFIGTYRTVQNYPLVCGPYRVPFLLNIPGSGQSVHGELYSVSTDGLSRMDELEGTSRGHYERLPIKVVPSGEEMEAKITCAEAYYAHGSYAMEMWKKNGKQGLKCYTENETIGYVKRKDRPQHLTFLDHIRLFLSD 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00143 177 Gene3D - 4 161 - -
Vifa6g00143 177 PANTHER TROPONIN C-AKIN-1 PROTEIN 13 176 IPR039126 GO:0061929
Vifa6g00143 177 CDD GGCT_like 16 117 IPR013024 -
Vifa6g00143 177 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 14 124 IPR036568 -
Vifa6g00143 177 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 16 122 IPR009288 -
Vifa6g00143 177 FunFam Putative gamma-glutamylcyclotransferase 4 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00143 Vifa-Chr6 58957131 58957664 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00143 K19761 - gmx:100802936 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00143 6 58957131 58957664 Vifa6g00143 6 58957131 58957664 ECH