Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00142 ATGGGTTGGGGAAGAGGAATATTCGAAGGTTCGGTAGTGGTGGGATGTCTGTGTTCACTTGGCTGGGCGGGTCTATGGTTTTTGAACCGTCGTCTCTACAAAGAGTACGAAGAGAAACGAGTTCTCGTTCAAATCATCTTCAGCGTCGTCTTTGCATTCTCTTGCAATCTTCTTCAACTTGTCATCTTCGAAATCATTCCCATCCTCTCCAAAGAGGCAAGAGTGGTCAACTGGAAGATTGACTTATTCTGTTTGATTCTATTGTTGGTCTTTCTTCTGCCTTATTACCATTGTTACTTGATGCTTAAAAACAGTGGTTTGAGAACTGAAAGGGCTGCTCTTGGAGCTCTTTTATTTTTGTTTGCTTTTCTCTATGCTTTTTGGCGTATGGGAATTCACTTTCCAATGCCATCCCCTGAGAATGGATTCTTCACTATGCCTCAACTCGTTAGTAGAATTGGAGTCATTGGTGTTACTGTCATGTCTGTTCTATCTGGTTTTGGTGCTGTAAACTTGCCATACAGTTATCTATCACTTTTCATCAGAGAGATTGAAGAAACTGAGATCAAGGCCTTGGAAAGACAATTAATGCAGTCAATTGAGACTGCTATATCAAAGAAAAAGAAAATTATTCTTGGTCAAATCGAGATGGACAGCAACCAAGGATCTCAGGAGAGGTTAACTGCCAGATCATTTATCAAACGTATTGTTGGTACAGTTGTTCGATCTGTGCAAGAAGACCAAAAAGAGCAAGATATCAAAGGCATGGAAGCAGAGGTACTGGCTTTAGAAGAGCTTTCAAAGCAATTGTTCTTGGAGATCTATGAGCTTCGTCAAGCAAAAGAAGCTGCTGCATATTCTCGAACTTGGAGAGGACATATGCAAAATCTACTTGGTTATGCTTGTTCCGTTTATTGTGTGTATAAAATGATCAAGTCATTGCAAAGTGTTGTTTTCAAACAGTCTGGTTCAGTTGACCCCGTGACAAGGATGATTAGTATATTCCTACAATTTTTTGATATTGGAATAAATGCAGCCTTATTATCTCAGTATATTTCCTTGCTGTTCATCGGAATGTTGGTTGTGATATCAGTGCGTGGATTCTTAACAAATTTAATGAAGTTCTTTTTCGCAGTTTCAAGAGTTGGAAGTGGATCGTCTAGCAATGTTGTCCTGTTTTTGTCTGAAATAATGGGAATGTATTTTCTATCTTCTATTCTTTTAATCAGGAAAAGCTTAGCAACTGATTACAGGATTATTATTACAGAGGTAATGGTGCATTCCTTTCTCTACTTTTACTATCTGCACATTATACATCTCGCCAAATCGACAAACATCCCATTGATTGAAACATATTCTCTTTATATACATGTATAG 1377 0.3834 MGWGRGIFEGSVVVGCLCSLGWAGLWFLNRRLYKEYEEKRVLVQIIFSVVFAFSCNLLQLVIFEIIPILSKEARVVNWKIDLFCLILLLVFLLPYYHCYLMLKNSGLRTERAALGALLFLFAFLYAFWRMGIHFPMPSPENGFFTMPQLVSRIGVIGVTVMSVLSGFGAVNLPYSYLSLFIREIEETEIKALERQLMQSIETAISKKKKIILGQIEMDSNQGSQERLTARSFIKRIVGTVVRSVQEDQKEQDIKGMEAEVLALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYACSVYCVYKMIKSLQSVVFKQSGSVDPVTRMISIFLQFFDIGINAALLSQYISLLFIGMLVVISVRGFLTNLMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFLSSILLIRKSLATDYRIIITEVMVHSFLYFYYLHIIHLAKSTNIPLIETYSLYIHV 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00142 458 Pfam The Golgi pH Regulator (GPHR) Family N-terminal 143 209 IPR022535 GO:0016020
Vifa6g00142 458 Coils Coil 182 202 - -
Vifa6g00142 458 ProSitePatterns Protein kinases ATP-binding region signature. 382 411 IPR017441 GO:0005524
Vifa6g00142 458 Pfam Abscisic acid G-protein coupled receptor 286 431 IPR025969 -
Vifa6g00142 458 Coils Coil 246 266 - -
Vifa6g00142 458 PANTHER G-PROTEIN COUPLED RECEPTOR 89-RELATED 11 434 IPR015672 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00142 - - gmx:100814132 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00142 6 58069134 58092677 Vifa6g00142 6 58069134 58092677 ECH