Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00102 ATGCGAAAGAAAGTGTGTAGTAGAGTAATGAGTGTAGCAACAGCAAGGTGGTTGGTGGGACCCACACCATTTCCTCTTGTTGTTTCCTGTCCATACAAGAATGCAGTAATGAAACCCTTCCACTCCTCCGTTGACGTGAGAATGTCCGGCGAGCATCCCTCGGTAGAAATCACGGGAGGCGCACGTGAGCGTTTCCTCCCATCTGTGACTCAACTGAGTCGCCCATACAAACCTTTCCCCTTGGTCGCATGGAACTGCCACGTGGAAACAATCTTCGCCGCGTTTTTCCGAACGACCCCAGACGTGAAGCTCCGGCGCGAGTGCCTGAGAACTGATGACGGTGGATCCGTGGCTCTCGATTGGGTTTCTGGTGATGAGCGACGGTTGCCTCGAGACGCTCCTCTTGTGATTTTGCTGCCAGGCTTAACTGGAGGTAGTGAGGATTCTTATGTTAGACACATGTTAGTTAGAGCGGCAACTAAAGCCTGGCGTGTTGTTGTCTTCAATAGTCGTGGATGTGGAGATAGCCCCGTCACTACTCCTCAGTTCTATTCAGCTTCCTTTTTAGGAGATATGCGCCAAGTTGTTTCCCATGTCTCTGCTAGATACCCCGACGCCAATTTATATGCAGTTGGTTGGTCACTTGGTGCAAATATTCTTGTTCGTTACTTGGGTCACCAATCACACAATTCTCCTCTTTCTGGCGCTGTATCTTTGTGCAATCCATTCAATTTGGTTCTCTCAGATCAAGACTTTCGAAAGGGCTTTAACAAAATTTATGACAAGGCTCTTTCTAAGGCTCTCCGCAACATTTTTCGCAAACATGCTTTACTCTTTCAAGATATTGGGGGCCAATATAACATTCCACTAGTTGCCAATGCCAAGTCTGTTAGGGAATTTGATGACGGACTAACCCGTGTTTCTTTTGGATTCAACTCTGTCGATGACTACTACTTTAATTCAAGCAGTTCAGATTCCATTAAACATGTTCAAACACCTTTGCTCTGCATCCAGGCAGCCAATGATCCGATTGCTCCTTCTAGGGGAATTCCTCGTCAAGATATCAAGGAAAATCCAAACTGCTTGTTAGTAGTGACATCTAAAGGTGGTCACCTGGGATGGGTTGCTGGCGATGAAGCTCCACTTGGAGCCCCTTGGACTGATCCTTTGGTGATTGATTTCCTTCAATATCTGGAGACAGAAGCAGCCAAAGCCCCACAAACTGGTAGCGATCCAGGAGATAATAAACAGACTTTGCATCACCTTCAAGTGTAG 1275 0.4698 MRKKVCSRVMSVATARWLVGPTPFPLVVSCPYKNAVMKPFHSSVDVRMSGEHPSVEITGGARERFLPSVTQLSRPYKPFPLVAWNCHVETIFAAFFRTTPDVKLRRECLRTDDGGSVALDWVSGDERRLPRDAPLVILLPGLTGGSEDSYVRHMLVRAATKAWRVVVFNSRGCGDSPVTTPQFYSASFLGDMRQVVSHVSARYPDANLYAVGWSLGANILVRYLGHQSHNSPLSGAVSLCNPFNLVLSDQDFRKGFNKIYDKALSKALRNIFRKHALLFQDIGGQYNIPLVANAKSVREFDDGLTRVSFGFNSVDDYYFNSSSSDSIKHVQTPLLCIQAANDPIAPSRGIPRQDIKENPNCLLVVTSKGGHLGWVAGDEAPLGAPWTDPLVIDFLQYLETEAAKAPQTGSDPGDNKQTLHHLQV 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00102 424 ProSitePatterns Uncharacterized protein family UPF0017 signature. 301 342 IPR000952 -
Vifa6g00102 424 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 52 406 - -
Vifa6g00102 424 Gene3D alpha/beta hydrolase 102 396 IPR029058 -
Vifa6g00102 424 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Vifa6g00102 424 FunFam Esterase/lipase/thioesterase family protein 110 382 - -
Vifa6g00102 424 SUPERFAMILY alpha/beta-Hydrolases 97 381 IPR029058 -
Vifa6g00102 424 MobiDBLite consensus disorder prediction 410 424 - -
Vifa6g00102 424 PIRSF Ab_hydro_YheT 35 421 IPR012020 -
Vifa6g00102 424 MobiDBLite consensus disorder prediction 404 424 - -
Vifa6g00102 424 Pfam alpha/beta hydrolase fold 134 372 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00102 Vifa-Chr6 33123019 33126561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00102 102 399 Miscellaneous Gene Families AT2G03140 32.667 2.13e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00102 - - mtr:25479443 691.034