Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00096 ATGGGTTCAGCAGCAGCAGAGGTTTTGTCTGAGAGAAGTAGTAATAAACTGGTTGGGATAAGGTTCCTCGAGTATTTAAAAGGAAGTTCTGTTTCCTTCAAAACCCATCAAGCGATTGTTTTGATTGTAACTTTTTTAGCTTATGCTAGTTATCATGCCACTAGAAAAACCACAAGTATTGTAAAGAGTGTTCTTGATCCCCAATCATCATCCAATCTAGGTTTCAATTTCTGGCTAGTAACAAATCACACTCGCTCAACACTTTCTTCCAACCTTGGTGATGGTTGGGCACCTTTTAATGGATCCGACGGGACATTGCTTCTTGGCCAATTGGATGTTGCTTTTCTCGCAGTGTATGCTTTTGGGATGTACTTTTCTGGACATTTTGGTGACAGGTGTAATTTGAGGATTTTTTTAACGATTGGGATGGTAGGAACTGGTGTTTTCACTTCCCTTTTTGGTTTTGGGTTTTGGGGAAATATCCACAATTTCTATTATTATTTGCTTCTTCAAATGATTGCTGGATTGTTTCAATCCACTGGATGGCCATCCGTAGTTGCTGTTTTGGGTAACTGGTTTGGAAAGAGAAAGAGAGGCTTGATCATGGGTATCTGGAATGCTCATACTTCTGTTGGTAACATTGCTGGTTCTTTGATTGCTTCTGCTATGCTGGGATATGGATGGGGGTGGTCTTTTCTTGTGCCAGGATTAATCATGTCTTTCCTCGGTTTCCTGGTTTTTGTCATATTGCCTGTTTCGCCTGACTTGGCTGGAGTCCAGGAAGATGATTATACTTGTCCAAAGAAAAGTGGAGATGGAGATGATGTCACAGAATCTCTCTTAAGGCAAGAGACTCCTGCACAAGAGAAAGAGAAAGCGGTAGGGTTCCTAGAGGCATGGAAAATTCCAGGGGTTGCTCCTTTTGCTTTTTGTCTCTTCTTTGCCAAATTGGTTGCATATACCTTTCTCTATTGGTTACCATTCTATGTTAGCCACACAGCTATTGATGGAAAATATCTATCCAGTGAGACATCAGGTTCATTATCTACTTTATTTGATGTTGGAGGAGTGCTTGGAGGAATTCTAGCCGGTCACATTTCTGACCGCTTAAATGCTAGAGCCATAACAGCAGCAAGTTTCATGTACTGTGCAATCCCCGCACTCTTCTTCTATCGAACCTATGGCCACATTTCATTGCTTGTAAATGGAACATTGATGTTTCTCACCGGCATGTTTGTAAACGGGCCTTACGCTCTTATAACAACAGCAGTTTCGGCTGACCTGGGAACACACAAGTCACTGAAGGGAAATTCACGCGCTCTAGCAACAGTCACGGCTATTATCGATGGAACTGGTTCTATAGGGGCTGCAATTGGACCTTTATTAACAGGGTACATCTCGGCAAAAAGCTGGAGTGCAGTTTTCACAATGCTGATGGGTTCAGCTTTAATAGCAGGGCTGTTTCTCACCAAGCTTGTTGTGTCAGAGGTGGCCACAAAGATCGAAGAGTCAAGGTCTAATAAAGCGCCGGAGTGTTCACTCGTGTGA 1548 0.4264 MGSAAAEVLSERSSNKLVGIRFLEYLKGSSVSFKTHQAIVLIVTFLAYASYHATRKTTSIVKSVLDPQSSSNLGFNFWLVTNHTRSTLSSNLGDGWAPFNGSDGTLLLGQLDVAFLAVYAFGMYFSGHFGDRCNLRIFLTIGMVGTGVFTSLFGFGFWGNIHNFYYYLLLQMIAGLFQSTGWPSVVAVLGNWFGKRKRGLIMGIWNAHTSVGNIAGSLIASAMLGYGWGWSFLVPGLIMSFLGFLVFVILPVSPDLAGVQEDDYTCPKKSGDGDDVTESLLRQETPAQEKEKAVGFLEAWKIPGVAPFAFCLFFAKLVAYTFLYWLPFYVSHTAIDGKYLSSETSGSLSTLFDVGGVLGGILAGHISDRLNARAITAASFMYCAIPALFFYRTYGHISLLVNGTLMFLTGMFVNGPYALITTAVSADLGTHKSLKGNSRALATVTAIIDGTGSIGAAIGPLLTGYISAKSWSAVFTMLMGSALIAGLFLTKLVVSEVATKIEESRSNKAPECSLV 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00096 515 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 498 IPR020846 GO:0022857
Vifa6g00096 515 FunFam glucose-6-phosphate exchanger SLC37A2 isoform X1 295 499 - -
Vifa6g00096 515 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 13 509 - -
Vifa6g00096 515 Gene3D MFS general substrate transporter like domains 299 508 IPR036259 -
Vifa6g00096 515 Gene3D MFS general substrate transporter like domains 30 263 IPR036259 -
Vifa6g00096 515 SUPERFAMILY MFS general substrate transporter 39 493 IPR036259 -
Vifa6g00096 515 PIRSF Hexose_phosphate_transp 23 510 IPR000849 GO:0016020|GO:0022857|GO:0055085
Vifa6g00096 515 FunFam Sugar phosphate exchanger 3 isoform 1 31 264 - -
Vifa6g00096 515 Pfam Major Facilitator Superfamily 99 428 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00096 Vifa-Chr6 28260073 28261708 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00096 14 512 Organic Solute Cotransporters AT3G47420 71.315 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00096 K13783 - gmx:100795072 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00096 6 28260073 28261708 Vifa6g00096 6 28260073 28261708 ECH