Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00091 ATGGACGCTCAGAGAGCTCTCCTCGACGAACTAATGGGTTCAGCTCGAAATTTGACGGAGGAAGAGAGAAGGGGTTATAAGGAAGTGAGCTGGGACGATAGAGAAGTTTGTGGTTTCTATATGGTCAGGTTTTGTCCTCACGATCTCTTCGTCAACACGCGTAGTGATCTTGGACCTTGCCCCAAAATACATGACCCAAAGTTGAAAGAAAGTTTTGAAAATTCCCCAAGACATGATGCCTACGTACCCAAATTTGAAGCCGAACTTTCTCAATTTTGTGAGAAATTGGTGATGGACCTGGATAGAAGAGTAAAACGTGGCCGGGAACGTCTTAATCAAGAGGTGGAGCTACCACCGCCGCCACCTCTGACCGCTGAGAAATCTGAACAGCTGTCTGTGCTGGAGGAGAAAATAAAGAACCTTCTGGAACAAGTTGAATCTCTTGGTGAAGCTGGGAAGGTTGATGAAGCTGAAGCTCTAATGCGAAAGGTGGAGACACTTAATACGGAGAAGGCAGTCTTAACACAGCCTCAAAATGAAAAAGTGTTAATGCTTCAGGAGAAGAAAATGGCACTCTGTGAGGTATGTGGTTCTTTTCTTGTGGCAAATGATGCTGCAGAAAGAACTCAGTCTCATGTTGCAGGAAAGCAGCATGTTGGCTATGGCATGGTTCGTGATTTCATAAATGAATACAAAACTGCTAAGGAAAAGGCTCATGAAGAAGAAAGATTGGCTCGGGAAAAAGAGGTAGAAGAGCGAAGAAAACAAAAGGAGAAGGATAATGAGAGAAAGAGACGAAGTGATTCAAGTGACAGGGAGAAATATCGGGATAAAGATCGAGACAGGGAGCTTGATCGGTACAGAGACAGAGACTCAGAACGTGAAAGATCTCGGGAATATGAAGTTAGACTTAGAGGTCATCGAGATCCGGGAAGGGAGATGGATTCTAGGTCGAGGAATGGAAAAAATGGGGGCAGAGACAGGTACCGCAATCGGAGCAGATCACGTTCCCCTATAAGGCATAACTACAGAAGGTCTTGA 1041 0.4496 MDAQRALLDELMGSARNLTEEERRGYKEVSWDDREVCGFYMVRFCPHDLFVNTRSDLGPCPKIHDPKLKESFENSPRHDAYVPKFEAELSQFCEKLVMDLDRRVKRGRERLNQEVELPPPPPLTAEKSEQLSVLEEKIKNLLEQVESLGEAGKVDEAEALMRKVETLNTEKAVLTQPQNEKVLMLQEKKMALCEVCGSFLVANDAAERTQSHVAGKQHVGYGMVRDFINEYKTAKEKAHEEERLAREKEVEERRKQKEKDNERKRRSDSSDREKYRDKDRDRELDRYRDRDSERERSREYEVRLRGHRDPGREMDSRSRNGKNGGRDRYRNRSRSRSPIRHNYRRS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00091 346 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 335 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vifa6g00091 346 Coils Coil 1 21 - -
Vifa6g00091 346 Pfam LUC7 N_terminus 2 248 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vifa6g00091 346 Coils Coil 124 151 - -
Vifa6g00091 346 MobiDBLite consensus disorder prediction 235 332 - -
Vifa6g00091 346 MobiDBLite consensus disorder prediction 235 346 - -
Vifa6g00091 346 Coils Coil 224 267 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00091 - - gmx:100792348 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00091 6 25958668 25960271 Vifa6g00091 6 25958668 25960271 ECH