Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00088 ATGATGGTGGATTTGGGTCCGTTCTCCAACGAGAACTTCGACCCCAAAAAATGGATCAACTCTGCGTGTCAGAGTCGACACCCTCAGGAGTCATTGGATAAGCACCTCGTCGATCTGGAGATGAAACTCCAGATGGTTTCCGAGGAAATCGCCGCTTCTCTCGAGGACCAGAGCACCGCTGCTCTCCTCCGTGTTCCTCGCGCCACTCGTGACGTCATCCGCCTTCGCGATGACGCCGTTTCTCTCCGTTCTGCTGTCTCCGCCATCCTCCAAAAGCTCAAGAAGGCAGAGGGATCGTCTTCTGAATCTATAGCGGCACTTGCTAAGGTCGATGTAGTTAAGCAGAGGATGGAAGCTGCTTATGAAACTTTGCAGGATGCTGCTGGATTAACCCAATTAAGTTCCACAGTGGAGGATGTATTCGCCAGTGGTGATCTTCCTCGTGCTGCTGAAACTCTCGCTAATATGAGGCATTGCTTGTCTGCTGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAGCAGCTTGAAGTCTTGGAGGATAGGCTAGACACAATGGTGCAGCCTCGTCTTACCGATGCATTATCCAATCGCAAGGTTGATGCTGCTCAAGATTTGCGTGGAATTCTCATTAGAATAGGAAGGTTTAAGTCTCTGGAATCTCAATATTCAAAGGTACATCTGAAACCGATTAAAAAACTTTGGGAAGACTTTGAATCAAGAGAGCGGGCTAATAAGTCTGCAAATGAGAAGAATGAAATAGAGAGAACATCAAGTGGTGGCAATTTTCAGTCTGTTTCACCTACAATATCGTTCTCCAATTGGCTACCTAGCTTTTATGATGAGCTACTACTTTATCTTGAACAAGAATGGAAATGGTGTATGATTGCTTTTCCAGAAGATTATAAAACTCTTGTCCCGAGGTTACTAAGCGAGACTATGATGGCTATAGGTGCAAGTTTCATATCTCATATCAATCTTGCCATTGGAGATGCTGTTCCAGAAACCAAAGCACTGGCTAAAGGTTTATCAGATATTTTATCTGGAGACATGCAAAAGGGTATTAAGCTTCAGACAAAGCACCTGGAGGCTTTGATTGAATTACACAATATCACCGGATCCTTTGCAAGGAATATTCAGCACTTATTTTCTGGTTCTGACGTACAAGTTTTAATGGATGTGCTGAAAGCCGTGTACTTGCCATATGAATCGTTTAAACAGAGGTATGGACAAATGGAGCATGCCATCCTTTCCTCTGAGATTGCAGGAATAGATTTAAGAGGAGCTGTAATTCGAGGGGTAGGAGCCCAAGGAGTTGAACTCAGTGAAACTGTTCGTAGGATGGAGGAGTCTATTCCTCAAGTTATTATACTTCTTGAAGCTTCTGCTGAGAGATGCATCAGTTTCACTGGAGGTTCTGAGGCAGATGAGCTGATTCTTGCCCTTGATGACATAATGTTACAATACATTTCCACTCTACAAGAAACTCTCAGGTCACTAAGAACTGTGTGTGGTGTGGATTATGGTGGCGATGGTACTGGAAAGAAAGACAGCGAGAAGAAAGATGCAAGTCAAAATGCTCGGAGAGTTGATTTGGTCTCAAATGAGGAAGAATGGTCCATGGTCCAAGGGGCACTACAGATCCTTACAGTTGCAGATAGTTTGACAAGCAGATCTTCTGTCTTCGAAGCATCTTTAAGAGCTACTCTTGCTAGATTAAGCACAACTTTATCTTTTTCTGCATTGGGTTCAAGCTTAGATCAAAACCTGACTATAAATGGTAATGAAGATGGAGAGCCATCTTTTGGTGGGAGGGCTGCCTTGGACATGGCAACACTGCGGCTGGTTGACGTGCCCGAGAAAGCCAGGAAACTCTTTAGCCTTTTAAATCAGTCTAAAGATCCCCGTTTCCATGCTCTTCCCCTTGCATCTCAAAGAGTTGCAGCATTTGAAGACACGGTTAATGAACTTGTATATGATGTCCTCATATCTAAAGTACGACAACGCCTTAGTGACGTATCCCGTTTGCCAATATGGTCATCAGTTGAGGAACAGAGTGCTTTTCCTCTCCCTACCTTCAGTGCATATCCACAGTCCTATGTGACCAGTGTTGGTGAGTATCTTCTTACTTTACCCCAACAACTGGAGCCCCTTGCTGATGGAATATCTGGCAGTGAAGCCAGTGATGAAGCACAGTTCTTTGCAACTGAATGGATGTTCAAGGTTGCAGAGGGTGCAACAGCACTCTACATAGAGCAGTTGCGTGGGATTCAGTACATTACAGATCGCGGTGCACAGCAGCTATCAGTTGATATTGATTATCTTAGTAACGTGCTTTCGGCTCTGTCAATGCCAATCCCTGCTGTTCTGGCTACGTTTCAAAGTTGTCTTTCTACCTCAAGAGACCAGCTAAAAGATCTTTTGAAGACAGATTCAGCAAACCAACTTGATCAGCCAACAGCAAATCTTGTGTGTAAGATGCGGCGGGTGAATTTAGATTCGTGA 2505 0.4443 MMVDLGPFSNENFDPKKWINSACQSRHPQESLDKHLVDLEMKLQMVSEEIAASLEDQSTAALLRVPRATRDVIRLRDDAVSLRSAVSAILQKLKKAEGSSSESIAALAKVDVVKQRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDTMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYSKVHLKPIKKLWEDFESRERANKSANEKNEIERTSSGGNFQSVSPTISFSNWLPSFYDELLLYLEQEWKWCMIAFPEDYKTLVPRLLSETMMAIGASFISHINLAIGDAVPETKALAKGLSDILSGDMQKGIKLQTKHLEALIELHNITGSFARNIQHLFSGSDVQVLMDVLKAVYLPYESFKQRYGQMEHAILSSEIAGIDLRGAVIRGVGAQGVELSETVRRMEESIPQVIILLEASAERCISFTGGSEADELILALDDIMLQYISTLQETLRSLRTVCGVDYGGDGTGKKDSEKKDASQNARRVDLVSNEEEWSMVQGALQILTVADSLTSRSSVFEASLRATLARLSTTLSFSALGSSLDQNLTINGNEDGEPSFGGRAALDMATLRLVDVPEKARKLFSLLNQSKDPRFHALPLASQRVAAFEDTVNELVYDVLISKVRQRLSDVSRLPIWSSVEEQSAFPLPTFSAYPQSYVTSVGEYLLTLPQQLEPLADGISGSEASDEAQFFATEWMFKVAEGATALYIEQLRGIQYITDRGAQQLSVDIDYLSNVLSALSMPIPAVLATFQSCLSTSRDQLKDLLKTDSANQLDQPTANLVCKMRRVNLDS 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00088 834 Pfam Golgi complex component 7 (COG7) 4 829 IPR019335 GO:0006886|GO:0017119
Vifa6g00088 834 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 3 830 IPR019335 GO:0006886|GO:0017119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00088 K20294 - gmx:100794449 1466.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00088 6 24715235 24720589 Vifa6g00088 6 24715235 24720589 ECH