Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03958 ATGGATCAATTAAATAACCAAACATTACTAGTTTTTCTCTCTTGCATGTTTCTAATATTTAACATTATTGTTCCACATGTTGAAGCAAGAGCATTTTTTGTTTTCGGTGATTCACTTGTTGACAATGGCAACAACAACTACTTAGCCACCACTGCTCGCGCCGACTCTTATCCATATGGCATCGATTATCCGACTCACCGTGCCACCGGACGTTTCTCTAATGGCCTTAACATGCCTGACCTTATCAGTGAGAAAATTGGCTCAGAACCCACATTACCATATCTGAGTCCTGAACTCAATGGAGAGGCACTACTAAATGGTGCTAACTTTGCTTCTGCTGGAATTGGAATTCTCAATGATACTGGAGTTCAATTTTTTAACATAATCAGAATTACAAGACAATTGCAGTATTTTGAGCAGTATCAACAAAGAGTGAGTGCATTGATTGGAGAAGAGGGAACAGTGAGATTGGTGAATGAAGCATTGTTTTTGATGACTTTAGGTGGAAATGATTTTGTGAACAATTATTTTGTTGTTCCTTTTTCTGCAAGATCACGACAATTTCGACTACCGGATTATGTTGTATACCTCATTTCTGAGTATCGTAAAATTCTTGTGGTTAGAATATTCAAGACTTAA 639 0.374 MDQLNNQTLLVFLSCMFLIFNIIVPHVEARAFFVFGDSLVDNGNNNYLATTARADSYPYGIDYPTHRATGRFSNGLNMPDLISEKIGSEPTLPYLSPELNGEALLNGANFASAGIGILNDTGVQFFNIIRITRQLQYFEQYQQRVSALIGEEGTVRLVNEALFLMTLGGNDFVNNYFVVPFSARSRQFRLPDYVVYLISEYRKILVVRIFKT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03958 212 Gene3D SGNH hydrolase 26 209 IPR036514 -
Vifa5g03958 212 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 30 205 - -
Vifa5g03958 212 Pfam GDSL-like Lipase/Acylhydrolase 33 204 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03958 Vifa-Chr5 1262293647 1262294710 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03958 31 176 Acyl Lipid Metabolism Gene Families AT4G10950 39.726 2.72e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03958 - - gmx:100819292 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03958 5 1262293647 1262294710 Vifa5g03958 5 1262293647 1262294710 ECH