Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03732 ATGGCATCATTGGAAGTAAAATCTGGTGCATTAGTTTCTTTACAAGATCTGCGACCATCGTCGCCTTTTTTCAAGCAAGGAACATCACTCAGAATAATTGGAAAGTTACACGAGTACTCTTTTGAGACAGGCCTAGCAACAGTTATTGATGGTAATGACATTCTAAAAGTTAATACTGAGCATTTGAGGGACCTTAGTTTTCAAGTTGGCTCTGTCTACCAATTCATTGGTGAACTCCTTATCCAACATGATAATGAGGGAGTTTTGCAGGCTCGTGTTGGTAGAAATGTGGACGGGATTGATCTCAACCTTTATCATCAATCTTTGCTGCTTTTGAGACAGTTTCAAGCCAATCATTTGAACAATTCAGCAAATTAA 378 0.3862 MASLEVKSGALVSLQDLRPSSPFFKQGTSLRIIGKLHEYSFETGLATVIDGNDILKVNTEHLRDLSFQVGSVYQFIGELLIQHDNEGVLQARVGRNVDGIDLNLYHQSLLLLRQFQANHLNNSAN 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03732 125 FunFam CST complex subunit TEN1 6 122 - -
Vifa5g03732 125 Gene3D - 7 121 IPR012340 -
Vifa5g03732 125 PANTHER CST COMPLEX SUBUNIT TEN1 1 124 IPR029146 GO:0003697|GO:1990879
Vifa5g03732 125 Pfam Telomere-capping, CST complex subunit 7 118 IPR029146 GO:0003697|GO:1990879
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03732 Vifa-Chr5 1200583212 1200584615 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03732 K23313 - gmx:100305519 223.787