Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03728 ATGCTAATTATCCTTCTACTCTTTCTACTAATCACTTCTTTTGGTCAAGTAATCAATGCATTTCCCTTAAGTGCTTGTCCAAATTGTGGTGACTTTGAAGTTCCATATCCACTCAGCACAAATGATAACTGTGGTGACAAAAGGTACAAAATTTACTGCAACAACCATACCTTAAAATTCTTGTCACCAACAGGAACATACTATAACATCCTTAAAATTGACCCAAATGCTAACAAGCTTATAATCAAACCACCTATCATACATAAACACACTTGTTACTCTTCTGATCTCTTTGGGGGAGGCTTAGTTCTTGATGAAAACTTACCCTTCAATATTTCTACACTCAACACTGTCATGCTCCTAAACTGCTCTAGTAATATCCTTCAATCTCCTCTTAACTGTTCATCAAACAGCATCTGTAGAGAGTTTGAGGAAAAAGTAGAGGAGGGAAAAGGGTGTATGAACACCCTTTGTTGTCATTACTTGAAAGATTCAGCTATGAATTCTCATAAGATCAGACTCCGAGTTGGAAGCTGTACTGCTTATAGTTGTTTGGTGAATTTCAAACCTGGTGACCCTTTTGAAACTTGGAGTTATGGGATTGAGTTGCAATGGGTGTCTCCTTATTAA 630 0.3714 MLIILLLFLLITSFGQVINAFPLSACPNCGDFEVPYPLSTNDNCGDKRYKIYCNNHTLKFLSPTGTYYNILKIDPNANKLIIKPPIIHKHTCYSSDLFGGGLVLDENLPFNISTLNTVMLLNCSSNILQSPLNCSSNSICREFEEKVEEGKGCMNTLCCHYLKDSAMNSHKIRLRVGSCTAYSCLVNFKPGDPFETWSYGIELQWVSPY 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03728 209 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 4 206 - -
Vifa5g03728 209 Pfam Wall-associated receptor kinase galacturonan-binding 26 81 IPR025287 GO:0030247
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03728 26 208 Receptor kinase-like Gene Family AT5G02070 37.895 1.29e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03728 - - tpra:123890956 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03728 5 1199042769 1199043398 Vifa5g03728 5 1199042769 1199043398 ECH