Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03720 ATGAAGACTGGCTCCATGATTTTTTCCTTTTTGCAAGTACCTAGATGCAGGATACACAGCTTAGCTAATAATTGGGGTGAAACCTTCCACAGCTTTGGCAACATTTGTCAAAACAATCACAGTGTAAGGTTGCTTAGTTCTAGAATTTATGGACTTCAGGGAGGCCACAGAAAAAAGTGGACCCGAAGACCGATAACTACAAATACAGAAAGCATCGCGGACACCAAATCAAGAAGCACCAAGCAAGAAATTTTGAGTGAAACAGTTTCAACTAGCTCTACGGTAAATGTAAATAAAGCACAGCTAGGCCAATTTCAGGAAATTCAGCAATGTAGCATTCAACAACAGATAGCTCAGAATAAAGACTTGTCTAGCTTAGTCACTGTTATTGTTTTTGATATTGAGACCACCGGGCTTAGCCGAGAGAAAGAAAGGATCATTGAGATCGCGCTTCGAGATCTTCAGGGTGGTCCGAACAGCACTTTCGAAACTCTTGTAAATCCTCAATGCTTTGTTGGAAACTCAAAAATCCATGGCATTACTACAGATATGGTGAACGAAGCTGGTGTTCCGAGGATGGAAGATCTGGTTCCCATATTATTACGCTATGTTCAAAGCCGTCAGAAACCTGGGGGATACGTGTTATGGGTTGCTCATAATGCTCGTACTTTTGATGTACCGTTTATCATTAACGAGTTACGTCGATGTTCTACACCGATTCCTCCGAATTGGCTGTTTCTGGACAGTCTTTCTATAGCACGTCAACTAAAGCCTGAAGGAACAAAACTTCCTTCAGTATCCCTTGATGCCCTTAGCAAGTTCTATGAAATTAAAGTGGATGGCTCAGCCCACAGAGCCATGGTAGATGTGAACACATTATCCATGATTTTTACTAGGTTGACCCGTGATTTGAAATTGACCCTGTCCGACCTTGTCGAAAGATCATTCAGAGAAGTTGATATGAAGAAGAAGAATTCAAAATAG 984 0.4136 MKTGSMIFSFLQVPRCRIHSLANNWGETFHSFGNICQNNHSVRLLSSRIYGLQGGHRKKWTRRPITTNTESIADTKSRSTKQEILSETVSTSSTVNVNKAQLGQFQEIQQCSIQQQIAQNKDLSSLVTVIVFDIETTGLSREKERIIEIALRDLQGGPNSTFETLVNPQCFVGNSKIHGITTDMVNEAGVPRMEDLVPILLRYVQSRQKPGGYVLWVAHNARTFDVPFIINELRRCSTPIPPNWLFLDSLSIARQLKPEGTKLPSVSLDALSKFYEIKVDGSAHRAMVDVNTLSMIFTRLTRDLKLTLSDLVERSFREVDMKKKNSK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03720 327 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 56 323 IPR040393 GO:0008408
Vifa5g03720 327 Pfam Exonuclease 130 293 IPR013520 -
Vifa5g03720 327 FunFam Exonuclease DPD1 chloroplastic/mitochondrial 127 310 - -
Vifa5g03720 327 CDD DEDDh 130 297 - -
Vifa5g03720 327 Gene3D - 127 317 IPR036397 GO:0003676
Vifa5g03720 327 SMART exoiiiendus 128 306 IPR013520 -
Vifa5g03720 327 SUPERFAMILY Ribonuclease H-like 128 303 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03720 - - gmx:100807346 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03720 5 1196163381 1196165267 Vifa5g03720 5 1196163381 1196165267 ECH