Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03688 ATGTCGTTGGTAACAGAAGAAATCAAGTCGAAGTCAGAGGTATATCATGGAGACGAACTAGGGCAAGTGAAATCCAAAGAGCTTCTTGCTGAAATTTGTCTTCCCAATGGTTTGTTACCATTGAAAGACATCATTGAAGTTGGTTACAACAGAGAAACAGGTTTTGTTTGGTTGAAACAGAAGAATAGCGTAACACACAAGTTTGAAAAGATTGGGAAACCTGTTATTTATGCTACTGAAGTTACAGCTTATGTTGAAAAAGGTAAGATTAAGAAACTGAGTGGTGTTAAAACTAAAGAGCTTATGATTTGGGTTACACTATGTGATATTTATGTTGATGATCCACCTACTGGTAAAATCACTTTCAAGACACCTTCTGGACTTTCTAGAACCTTCCCAGTTTCTGCTTTTGAAGTTGAAGATACTGTTAAAGAGGTTTAG 441 0.3628 MSLVTEEIKSKSEVYHGDELGQVKSKELLAEICLPNGLLPLKDIIEVGYNRETGFVWLKQKNSVTHKFEKIGKPVIYATEVTAYVEKGKIKKLSGVKTKELMIWVTLCDIYVDDPPTGKITFKTPSGLSRTFPVSAFEVEDTVKEV 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03688 146 PANTHER T31J12.3 PROTEIN-RELATED 13 140 IPR007493 -
Vifa5g03688 146 SUPERFAMILY At5g01610-like 3 142 IPR036758 -
Vifa5g03688 146 Gene3D - 5 146 IPR036758 -
Vifa5g03688 146 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03688 Vifa-Chr5 1185929307 1185929747 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03688 - - gmx:100500427 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03688 5 1185929307 1185929747 Vifa5g03688 5 1185929307 1185929747 ECH