Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03684 ATGGCTAGATTGGTGGCATTCCAACAGAATCAACTGTCTTTCCCTCCTTTAGCTTCCTCTCTTTCTGATTTCAATGGAACAAGACTTCAAACTCACATTCAGTTGAAAAGAAAAACATGGCAGCCAAAAGGATCCTTATATGTCTCAGCATCAAGCACAAAGAAAATTCTCATCATGGGAGGTACTAGATTCATTGGTGTGTTTTTGTCTAGGCAACTTGTCAAAGAAGGTCACCAGGTAACTTTATTTACAAGAGGAAAAGCACCTATCACTCAACAATTGCCAGGTGAATCAGACACTGATTTTGCTGATTTTTCTTCAAAGATCTTGCATTTGAAAGGGGACAGGAAGGACTATGATTTTGTAAAATCTAGTCTCTCAGCTGAAGGATTTGATGTTGTTTATGACATAAATGGACGAGAGGCGGAAGAAGTCGAGCCAATACTTGATGCTCTCCCCAATCTAGAACAGTTCATTTACTGTTCTTCTGCTGGTGTCTATCTCAAATCTGATTTATTACCTCACGCCGAGATTGATGCAGTTGACCCTAAGAGCAGACACAAGGGAAAGCTTGAAACAGAAAGCTTGTTGCAATCAAAGGATGTTAACTGGACATCTATAAGGCCAGTTTACATTTATGGACCTTTGAACTACAACCCTGTTGAAGAGTGGTTCTTCCACAGACTGAAAGCCGGTCGCCCGATTCCTATTCCCGGCTCAGGAATACAGATAACTCAACTTGGTCATGTTAAGGATTTGGCGACAGCTTTTGTGAAGGTTCTTGGAAACGATAAGGCCAGCAAGCAGATATTCAACATCTCAGGAGACAAATATGTCACATTTGATGGACTAGCAAGAGCATGTGCTAAGGCCGGTGGGTTCCCTGAACCCGAGCTCATTCACTACAATCCTAAAGATTTTGATTTTGGAAAAAAGAAATCGTTTCCATTTCGCGACCAGCATTTCTTTGCATCAGTGGAGAAAGCAAAAAGTGTGCTTGGGTTGGAACCTGAATACGGGCTTGTAGAAGGTCTTACAGATTCGTATAACCTCGACTTTGGTAGAGGAACTTTCCGCAAAGAAGCTGATTTTTCAACAGATGATATAATTCTTGGCAAGAGTCTTGTTAGTGTATGA 1137 0.4125 MARLVAFQQNQLSFPPLASSLSDFNGTRLQTHIQLKRKTWQPKGSLYVSASSTKKILIMGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEIDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATAFVKVLGNDKASKQIFNISGDKYVTFDGLARACAKAGGFPEPELIHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVLGLEPEYGLVEGLTDSYNLDFGRGTFRKEADFSTDDIILGKSLVSV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03684 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 347 IPR036291 -
Vifa5g03684 378 Gene3D - 51 351 - -
Vifa5g03684 378 CDD SDR_a1 54 307 - -
Vifa5g03684 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 53 360 - -
Vifa5g03684 378 Pfam NAD dependent epimerase/dehydratase family 56 273 IPR001509 -
Vifa5g03684 378 FunFam Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 52 351 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03684 - - lja:Lj1g3v4790750.1 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03684 5 1185195801 1185197997 Vifa5g03684 5 1185195801 1185197997 ECH