Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03666 ATGAGTTGGAGTGTGTCATTCTCAATCTCACTTCTATGGATATGTATCTTCTCTTCTTTTTCTTCTTCTTCACTGGCTTCTGCTGTTACATTGAGTGGTGGATGCAATAAACCTCCCATTCTATTCGTGTTCGGCGATTCAAACTCGGACACGGGTGGACTCGTATCCGGACTCGGTTTCCCTGTCAATCTTCCCAATGGTCGGACTTTCTTTCGCAGATCTACTGGTCGCTTGTCCGATGGACGACTAGTCATTGATTTTCTTTGTCAAAGTTTGAATACAAGAATTTTGACCCCATACTTGGACTCCTTGTCTGGATCAGGATTCACAAATGGAGCAAACTTTGCAGTGCATTTCAAAGCTCGTAGCCTTCAACTTGCTTCCTCAGGTACAAAAAATATGATCAACGAAGAAGGCTTCCGCGGTGCACTTTACTTGATTGATATTGGGCAAAATGACCTTGCTGATTCATTTACCAAAAATCTATCATATGCGCAAGTCGTCAAGAAGATCCCAACAGTTATCGCTGAAATTGAGAATGCTGTTAAGAGTCTGTATAATGAAGGTGGCAGGAAATTTTGGCTTCACAATACCGGACCGTTTGGCTGTCTTCCTAAATTAATCGCACTGTCTGACAAGAAAGACCTCGATTCATTTGGATGTCTTTCTAGTTACAATTATGCTGCAAGATTGTTTAACGAAGCGCTGTATCATTCGAGTCAGAAACTAAGAACTGAGTTGAAGGATGCTACCTTAGTTTATGTTGATATTTATGCCATTAAGAATGATCTCATCGCAAATGCCACCAAATACGGTTTCTCGAATCCGTTGATGGTGTGCTGCGGCTACGGAGGACCACCTTATAATTTCAATGTAAGAGTGACATGTGGTCAACCTGGTTATCAGGTTTGTGATGAAGGATCTCGCCATGTGAGTTGGGATGGAATCCATTACACCGAGGCTGCAAATACATGGATAGCTTCTAAAATACTTTCGACGGCTTATTCCACGCCACGGACGCCTTTTGGTTTCTTCTGCAGCCACTGA 1047 0.426 MSWSVSFSISLLWICIFSSFSSSSLASAVTLSGGCNKPPILFVFGDSNSDTGGLVSGLGFPVNLPNGRTFFRRSTGRLSDGRLVIDFLCQSLNTRILTPYLDSLSGSGFTNGANFAVHFKARSLQLASSGTKNMINEEGFRGALYLIDIGQNDLADSFTKNLSYAQVVKKIPTVIAEIENAVKSLYNEGGRKFWLHNTGPFGCLPKLIALSDKKDLDSFGCLSSYNYAARLFNEALYHSSQKLRTELKDATLVYVDIYAIKNDLIANATKYGFSNPLMVCCGYGGPPYNFNVRVTCGQPGYQVCDEGSRHVSWDGIHYTEAANTWIASKILSTAYSTPRTPFGFFCSH 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03666 348 Pfam GDSL-like Lipase/Acylhydrolase 41 330 IPR001087 GO:0016788
Vifa5g03666 348 SUPERFAMILY SGNH hydrolase 41 332 - -
Vifa5g03666 348 CDD SGNH_plant_lipase_like 39 332 IPR035669 -
Vifa5g03666 348 Gene3D SGNH hydrolase 37 336 IPR036514 -
Vifa5g03666 348 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 17 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03666 Vifa-Chr5 1181410943 1181413188 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03666 21 330 Acyl Lipid Metabolism Gene Families AT4G10950 24.566 2.19e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03666 - - gmx:100797617 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03666 5 1181410943 1181413188 Vifa5g03666 5 1181410943 1181413188 ECH